Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000765035.1_202014-09-29] 776 sequences; 33,668,918 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq403 98.7 8e-16 >seq403 Length=43082 Score = 98.7 bits (108), Expect = 8e-16 Identities = 203/297 (68%), Gaps = 4/297 (1%) Strand=Plus/Plus Query 29528 GGGTGAGGGTCGTAGCCCTCCAGGGAGAAATCCTCTGCCTTAAAGTCGTCCAGGCTCTCC 29587 ||||| |||||||||||||||| || ||||| | ||||||| || | | | || Sbjct 18166 GGGTGCGGGTCGTAGCCCTCCACAACAAAGTCCTCGTTCGTAAAGTCATCGATGTTTTCT 18225 Query 29588 ACCCTCCT-GTTTATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAATCCT 29646 ||| | | | ||| | | | || || || | ||||||| ||||||||||| | | Sbjct 18226 ACCTTGCGCGGCCATCGG-ATTTTAGGGAACGGACGCGGCTCCCGCTCGAGCTGAACCTT 18284 Query 29647 CAGCGGTTCCACGTGGTCAAGGTAGACGTGAGCATCTCCCAGGGTGT-GGACAAACTCTC 29705 |||| ||| ||||| || |||||||||| || || ||| | ||| | ||||| Sbjct 18285 GAGCGCTTCAACGTGATCGCGGTAGACGTGCGCGTC-GCCAAGCTGTATTATCAACTCGT 18343 Query 29706 CCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGT 29765 ||||| | || ||||| |||| ||| | ||||| || | ||| ||| |||| Sbjct 18344 GAGGTTCGGTGTCCGTAACGTGCGCCACCATATGGGTGAGCAGGGCGTAAGAGGCAATGT 18403 Query 29766 TAAAGGGCACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCT 29822 | ||||| | ||||| || | ||| | || | |||||| | | |||| ||||||| Sbjct 18404 TGAAGGGAATACCGAGGCCAAGGTCGGCGGAGCGCTGGTACATCAGGCAGGAGAGCT 18460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406159358711536