Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000765035.1_202014-09-29] 776 sequences; 33,668,918 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq403 102 6e-17 >seq403 Length=43082 Score = 102 bits (112), Expect = 6e-17 Identities = 203/298 (68%), Gaps = 2/298 (1%) Strand=Plus/Plus Query 27384 GGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCAC 27443 ||| ||||| |||| | ||||||||| | ||| || |||| | |||| ||| | Sbjct 18605 GGGATTCCACGCGCTGAGGATGATGCGACGGTCGGTGGGATTGTGCTTGATCTTGTCGAT 18664 Query 27444 GGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTACC-CTCATGTCCGTGTACT 27502 | | || ||||||||||| ||| | || | || | | | || |||| ||| Sbjct 18665 GCACTCCTGGAGCTGATCCACGCCCTTGCCGGTATAATTGGCGTCGCA-GTCCTCGTATC 18723 Query 27503 CTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGT 27562 ||| || || || |||||||||||||| || || || || ||||| |||||| || | Sbjct 18724 GTGCGCCAAAGTGTCTCCATTGGAACCCATATACGGGCCCTAGGTCGCCCTCTCGCCGAT 18783 Query 27563 GCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCC 27622 | | || || | ||| || | || || | || ||||| | ||||| ||||| | | Sbjct 18784 GTCCTAAACCGCGCTTCTCGAGGAACTCCTTCGAGCCGTTACCATCCCAAATCTTGATGC 18843 Query 27623 CCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTC 27680 ||||| |||| |||| ||||||| ||| | || | | |||||| | |||||||| Sbjct 18844 CCTTCGCGGACAGCTGCTTGGAGTCCGTGCATCCGCGTATGAACCATAAGAGCTCCTC 18901 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369503705385656