Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000765035.1_202014-09-29] 776 sequences; 33,668,918 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq460 116 3e-21 >seq460 Length=141031 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || |||||||| || |||||| || |||||||| || | || ||| | || || Sbjct 61118 ACGAGGTGAAGGGTCGACTCCTTCTGAATGTTGTAGTCCGAAAGCGTGCGGCCATCCTCG 61177 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||| ||||| | |||||||| || | || | ||| ||||| ||| Sbjct 61178 AGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGCGGGATACCCTCCTTGTCCTGG 61237 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 |||||| ||||| | | |||||||| | || || ||||| | || || ||||| Sbjct 61238 ATCTTCGCCTTCACATTGTCGATGGTGTCCGACGACTCGACCTCGAGAGTGATGGTCTTG 61297 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || ||||| |||||||||||||| Sbjct 61298 CCGGTCAGAGTCTTAACGAAGATTTGCAT 61326 Score = 87.8 bits (96), Expect = 1e-12 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 44132 AGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGC 44191 ||||| || ||||||||||| || ||||| ||||||| ||| || | || ||||| Sbjct 61812 AGGTGGAGAGTGCTCTCCTTCTGAATGTTATAATCGGAGAGGGTACGACCATCCTCCAGT 61871 Query 44192 TGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTC 44244 ||||| || |||||||| | ||||||||| || | ||| | ||| ||||| || Sbjct 61872 TGCTTGCCAGCAAAGATGAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTC 61924 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359986995390792