Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000787515.1_202014-11-26]
9,648 sequences; 31,621,284 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq38 109 1e-18
>seq38
Length=96116
Score = 109 bits (120), Expect = 1e-18
Identities = 123/165 (75%), Gaps = 0/165 (0%)
Strand=Plus/Plus
Query 230446 CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 230505
|| || ||||||||||| || || ||| | ||||| ||||| |||||||| ||||| |
Sbjct 72816 CTCATCGGCATGAACGCCGACCTCATGTGCCAGTATATCGAGTTCGTAGCGGACCGTCTG 72875
Query 230506 TTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAG 230565
| || || || || ||||||| ||| | | | |||||| || | || |||||
Sbjct 72876 CTCGTCGCGCTCGGGAACGAGAAGCACTACCGCGCCACGAACCCGTTCGACTTCATGGAC 72935
Query 230566 CTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTC 230610
||||| ||||| || || ||||||||||||||||| || || |||
Sbjct 72936 CTCATCTCGCTCCAGGGCAAGACCAACTTCTTCGAGAAACGCGTC 72980
Score = 96.9 bits (106), Expect = 7e-15
Identities = 146/208 (70%), Gaps = 0/208 (0%)
Strand=Plus/Minus
Query 230428 GACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAA 230487
||||| | |||||| ||| || ||||||||| | | || ||| | |||||||||||
Sbjct 69902 GACGCGCTCCCATGTGCCCTCATCGGCATGAACTCGAAGCTCATGTGCCAGTACATCGAG 69843
Query 230488 TTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAAC 230547
||||| || || || || | || || || || | ||||| |||||| | |||
Sbjct 69842 TTCGTCGCTGATCGTCTTCTCGTCGCTCTCGGCGATGAGAAGTACTACAACGTGACCAAC 69783
Query 230548 CCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGT 230607
|| || | || ||||| | || ||||| || || ||||| ||||||||||| |||||
Sbjct 69782 CCGTTCGATTTCATGGACATGATCTCGCTCCAGGGCAAGACAAACTTCTTCGAGAAGCGG 69723
Query 230608 GTCAGTGACTATCAGAGGCCTGGTGTGA 230635
|| |||||| || | |||||||
Sbjct 69722 GTGTCCGACTATTCGAAAGCGGGTGTGA 69695
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057693237086240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |