Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000787515.1_202014-11-26] 9,648 sequences; 31,621,284 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq38 114 1e-20 >seq38 Length=96116 Score = 114 bits (126), Expect = 1e-20 Identities = 294/448 (66%), Gaps = 0/448 (0%) Strand=Plus/Plus Query 16202 CACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAAC 16261 |||||||||||| || | || ||||| | |||||| || ||||| || || | Sbjct 70048 CACGCGAAGTCGGTGTGCATGCCCTCGTCACGCGAGATAAGCTCATTGGAGAACGTGAGA 70107 Query 16262 CCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAAT 16321 || ||||| || || ||||| | |||||| || | ||||| || || || ||||| Sbjct 70108 CCGGGCATCAGGCCGCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGAACCAGAGAAGAAG 70167 Query 16322 ATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGA 16381 |||||||| |||| || ||||| | | || |||||| | | | || || | | Sbjct 70168 ATACCCTCCACAGCCGCGAAAGCCACGAGCCGCTCCGCGAAGGCGGACTCCTTGTCAGAG 70227 Query 16382 ATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTTA 16441 ||||| | | |||| || || || | || || ||| ||||| || ||||| | Sbjct 70228 ATCCAGTGCAAAGCCCAGTCCGCCTTCTTCTTGATGCAAGGAATCGTCTCGATGGCGTCG 70287 Query 16442 AACAATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTACATT 16501 || | | ||| | || ||| | || ||||| || || || | ||| | Sbjct 70288 AAAAGGTGCTCGCGCTGCTTGGGATCCTTGATGTACGTGTCGATGAGCAGCGAGTATGTC 70347 Query 16502 TCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATT 16561 || ||||| |||||||| || ||||| || || |||||||| || ||||| || Sbjct 70348 TCCGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGTGCCTCGGCGGCC 70407 Query 16562 TGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAGCA 16621 || || || | | || || || | |||||||| |||||||| ||||| ||||| Sbjct 70408 TGGACCTCATTGGAGAACCGCTCGACAAGGTTCTCGTTCACGATGCCGTCCGAGGCAGCG 70467 Query 16622 AAAAACGCCAATATGTGCTTAATGAAAT 16649 || || || | | |||| ||||||| Sbjct 70468 AAGAAGGCGAGCACGTGCGAGATGAAAT 70495 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511352723423360