Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000787515.1_202014-11-26] 9,648 sequences; 31,621,284 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq38 414 1e-110 seq7597 150 2e-31 seq1153 127 2e-24 seq2399 109 6e-19 seq6239 93.3 4e-14 >seq38 Length=96116 Score = 414 bits (458), Expect = 1e-110 Identities = 486/655 (74%), Gaps = 9/655 (1%) Strand=Plus/Minus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||| ||||| || |||||||| | ||||||| ||||||| Sbjct 70604 ATTTGGCAGATGTACAAGAAGGCTGAGGCTTCATTCTGGACTGCCGAGGAGATGGACCTT 70545 Query 116696 TCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 ||||||||| ||| ||| | ||| | |||||| | ||||| ||||||||| | Sbjct 70544 TCCAAGGACCTCCACGATTGGAACAACCGCCTCAACGACGATGAGCGTCATTTCATCTCG 70485 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 |||||||| ||||| ||||| ||| ||||||||||| |||||||| || |||||||| Sbjct 70484 CACGTGCTCGCCTTCTTCGCTGCCTCGGACGGCATCGTGAACGAGAACCTTGTCGAGCGG 70425 Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872 ||| | | ||||| |||| |||||||| || |||||||||||||| |||||| ||| Sbjct 70424 TTCTCCAATGAGGTCCAGGCCGCCGAGGCACGCTGCTTCTACGGCTTCCAGATCATGATG 70365 Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGAG 116932 |||||| | |||||||| | || ||| ||||||||||||||| | | | || Sbjct 70364 GAGAACATCCACTCGGAGACATACTCGCTGCTCATCGACACGTACATCAAGGATCCCAAG 70305 Query 116933 GAG---AAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCC 116989 || ||| || | || |||||||||||||||| || ||| |||| ||||||| Sbjct 70304 CAGCGCGAGCACC---TTTTCGACGCCATCGAGACGATTCCTTGCATCAAGAAGAAGGCG 70248 Query 116990 GAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCC 117049 || ||||| ||| ||||||| | | || ||| ||||||||| ||||| || ||||| Sbjct 70247 GACTGGGCTTTGCACTGGATCTCTGACAAGGAGTCCGCCTTCGCGGAGCGGCTCGTGGCT 70188 Query 117050 TTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAG 117109 |||||||| || ||||| ||||||| || || || ||| |||| || ||||||||| Sbjct 70187 TTCGCGGCTGTGGAGGGTATCTTCTTCTCTGGTTCCTTTGCCTCCATCTTCTGGCTCAAG 70128 Query 117110 AAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGT 117169 || |||||||| |||||||| || || ||| ||| ||||| ||||| | |||||||| Sbjct 70127 AAGCGCGGCCTGATGCCCGGTCTCACGTTCTCCAATGAGCTTATCTCGCGTGACGAGGGC 70068 Query 117170 CTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGGCG 117229 |||| |||||| || || ||||| |||| ||| | | ||| || | ||| | Sbjct 70067 ATGCACACCGACTTCGCGTGCTTGCTTTTCAGTCATCTCAAGAGGCGCCCCCACCCGGAG 70008 Query 117230 CGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCG 117284 | || | | ||| |||| || |||||||| ||||||||| ||| | |||| Sbjct 70007 ATCATCCGTCAAATCATCACTGAGGCGGTCGCTATCGAGCAGGAGTTCTTGACCG 69953 Score = 331 bits (366), Expect = 1e-85 Identities = 472/658 (72%), Gaps = 15/658 (2%) Strand=Plus/Plus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| || ||| | |||||||||||||||||||||||| | |||| Sbjct 72090 ATATGGCAGATGTACAAGAACGCCCAAGCGTCGTTCTGGACCGTCGAGGAGATCAACCTC 72149 Query 116696 TCCAAGGACACGAGCGACTGGGAGCGCTTG---AACGACAACGAGCGCCATTTCATCAAG 116752 |||| ||| | |||||| | | | |||| ||||||||||| |||||| Sbjct 72150 GCCAACGACCTCATGGACTGGAACTACAAGCTCAACGCAAACGAGCGCCACTTCATCTCC 72209 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 ||||||| || || ||||||||| ||||||||||| ||||||||||| |||||||| Sbjct 72210 TACGTGCTTGCTTTCTTCGCCGCCTCGGACGGCATCGTGAACGAGAATCTCGTCGAGCGG 72269 Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872 ||| || | ||||| |||| ||||||||||| ||||| || ||||| |||||| || Sbjct 72270 TTCTCTAACGAGGTACAGGCCGCCGAGGCGCGCTGCTTTTATGGCTTCCAGATCATGATC 72329 Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTA---CGTGCGCTCTTCG 116929 ||||| ||||||||||| | ||| ||| |||||||||||||| | | | | | Sbjct 72330 GAGAATGTGCACTCGGAGACGTACTCGCTGCTCATCGACACGTATATCAAGGACCCCGCT 72389 Query 116930 GAGGAGAAGCTCCGTT--TGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGG 116987 || | || |||| |||| |||||||||| || || ||||| || |||||| Sbjct 72390 GA----ACGC-GCGTTCCTGTTCGACGCCATCGACACCATCCCGTGTATCCGTAAGAAGG 72444 Query 116988 CCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAG-GCCGCCTTCGGCGAGCGCCTGGTG 117046 | || |||||| |||||||||| | || ||| | | | || | ||| | ||||| Sbjct 72445 CGGACTGGGCGTTGCGCTGGATTG-AGGACGAGCGTTCAGTGTTTGCGGAGAGGCTGGTC 72503 Query 117047 GCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTC 117106 || || ||||| ||||||||||| ||||| || || ||||||||||| || ||||| Sbjct 72504 GCATTTGCGGCAGTCGAGGGCGTGTTCTTCTCCGGGTCGTTCGCCGCCATTTTCTGGCTG 72563 Query 117107 AAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAG 117166 ||||| || || | ||||| || |||| ||| |||||||| ||| | | |||||| Sbjct 72564 AAGAAGCGGGGGTTGATGCCGGGGTTGACGTTCTCTAACGAGCTTATCAGCCGAGACGAG 72623 Query 117167 GGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCG 117226 ||| |||| ||||||||| ||| | || ||| | ||| || || |||| | || Sbjct 72624 GGTATGCACACCGACTTTGCGTGTCTCCTCTTCCACCATCTGCGGCGAAAACCGCACCCG 72683 Query 117227 GCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCG 117284 |||||| | ||||| || || || || | || || || |||||||||| Sbjct 72684 AAGCGCGTGCTGCGCATCGTAACTGAGGCAGTAGAGATTGAAAAGGAGTTCCTCACCG 72741 >seq7597 Length=53330 Score = 150 bits (166), Expect = 2e-31 Identities = 161/210 (77%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || |||||||| || || |||||| | || || || | | Sbjct 51331 ATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTTGAGTCGTCA 51390 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| |||||| || |||| ||||| ||||| ||||| | ||||| Sbjct 51391 GACACCATTGACAACG-TCAAGGCGAAGATTCAGGACAAGGAGGGTATCCCTCCCGACCA 51449 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||||| || |||| ||| ||||| |||||||| |||| ||||||||| |||||||| Sbjct 51450 GCAACGTCTTATCTTCGCCGGCAAGCAGCTGGAGGACGGACGCACCCTCTCAGACTACAA 51509 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||||| | || || ||||| || Sbjct 51510 CATCCAGAAGGAGTCTACCCTCCATCTTGT 51539 Score = 145 bits (160), Expect = 8e-30 Identities = 171/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || ||||| || ||||| || | || ||||| | || Sbjct 52068 ATGCAGATCTTTGTCAAGACCCTTACGGGAAAGACCATTACGTTGGAGGTCGAGTCTTCC 52127 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| |||||| || || | ||||| ||||||||||| |||| || Sbjct 52128 GACACGATCGACAACG-TCAAGGCGAAGATCCAGGACAAGGAGGGCATCCCTCCGGATCA 52186 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || ||||||| |||||| || ||| |||| |||| ||| || ||| ||||||||| Sbjct 52187 GCAGCGCCTCATCTTCGCGGGGAAGCAGTTGGAGGACGGGCGTACGCTCTCCGACTACAA 52246 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||||||||||||| |||| || ||||| || |||| | | |||||| Sbjct 52247 CATCCAGAAGGAGTCCACCCTCCATCTCGTCCTGCGTCTCCGTGGCGGC 52295 Score = 132 bits (146), Expect = 5e-26 Identities = 155/207 (75%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| |||||||| || ||||| || ||||| | || |||||| || || Sbjct 51559 ATGCAGATCTTCGTGAAAACGCTTACCGGCAAGACTATCACTCTTGAGGTCGAATCCTCC 51618 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | | |||| | |||| || |||| ||||| |||||||| ||| | || || Sbjct 51619 GATACCATCGACAACG-TAAAGGCGAAGATTCAGGACAAGGAGGGCATTCCCCCTGATCA 51677 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || | |||| ||| ||||| ||||| || || | ||| ||| | ||| ||||| Sbjct 51678 GCAGCGCTTGATCTTCGCTGGCAAGCAGCTTGAGGATGGGCGGACCTTGTCCGATTACAA 51737 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCT 40895 ||||||||||||| |||| || || || Sbjct 51738 CATCCAGAAGGAGTCCACTCTCCACCT 51764 Score = 118 bits (130), Expect = 1e-21 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || ||| | || ||||| |||||||| | || ||||| | | Sbjct 51840 ATGCAAATCTTCGTGAAGACGTTGACTGGCAAGACCATCACGCTTGAGGTCGAGTCGTCG 51899 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | | |||| | |||| || || | ||||| ||||||||||| | ||||| Sbjct 51900 GATACCATCGATAACG-TGAAGGCGAAGATCCAAGACAAGGAGGGCATCCCTCCCGACCA 51958 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || |||| ||| || || |||||||| |||| || ||| | || ||||| Sbjct 51959 GCAGCGTCTTATCTTCGCTGGAAAGCAGCTGGAGGACGGCCGTACCTTGTCGGATTACAA 52018 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 ||||||||||||| | || || || | || | |||||| | || ||| Sbjct 52019 CATCCAGAAGGAGTCGACCCTTCACTTGGTCCTCCGCTTGCGTGGTGGC 52067 Score = 93.3 bits (102), Expect = 4e-14 Identities = 84/106 (79%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 40793 GCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCA 40852 ||||||| | |||||||| || || |||| |||||||| ||||| || |||| |||| Sbjct 51206 GCATCCCTCCTGACCAGCAGCGCCTGATCTTTGCGGGCAAGCAGCTCGAAGACGGCCGCA 51265 Query 40853 CCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||| ||||||||||||||||| ||| | || || || ||||| Sbjct 51266 CCCTCTCGGACTACAACATCCAGAAAGAGTCTACTCTTCACCTAGT 51311 >seq1153 Length=45894 Score = 127 bits (140), Expect = 2e-24 Identities = 154/207 (74%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || ||| | ||||| || |||||||| |||| ||||| | || Sbjct 2513 ATGCAGATCTTTGTCAAGACGTTGACGGGGAAGACCATCACTCTCGAGGTCGAGTCTTCC 2454 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| | |||| || |||| ||||| ||||||||||| | ||||| Sbjct 2453 GACACGATCGACAACG-TGAAGGCGAAGATTCAGGACAAGGAGGGCATCCCGCCCGACCA 2395 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || |||| ||| ||||| ||||| || || | |||||| | ||||||||| Sbjct 2394 GCAGCGTCTGATCTTCGCTGGCAAGCAGCTTGAGGATGGTCGCACCTTGTCCGACTACAA 2335 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCT 40895 ||||||||||||| ||| || || || Sbjct 2334 CATCCAGAAGGAGAGCACCCTTCACCT 2308 Score = 125 bits (138), Expect = 7e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || || || ||||| |||||||| |||| ||||| | | Sbjct 1997 ATGCAAATCTTCGTTAAGACTCTGACCGGCAAGACCATCACTCTCGAGGTCGAGTCGTCG 1938 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | | |||| || || | ||||| ||||| ||||| | |||||| Sbjct 1937 GACACCATCGACAATGTGAAGGCGAAGATCCAGGACAAGGAGGGTATCCCGCCCGACCAG 1878 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || ||||||| ||| ||||| ||||| || || | ||||| || ||||||||| Sbjct 1877 CAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACGCTTTCGGACTACAAC 1818 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||||||| | || || || || || Sbjct 1817 ATCCAGAAGGAGTCGACCCTTCACCTCGT 1789 Score = 123 bits (136), Expect = 3e-23 Identities = 155/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || |||||||| || || |||||| | || || ||| | | Sbjct 2225 ATGCAAATCTTCGTCAAGACCCTCACGGGTAAGACGATCACCTTGGAGGTTGAATCGTCG 2166 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | |||| |||||| ||| || | || || ||||| ||||| ||||||| Sbjct 2165 GATACAATCGACAACG-TCAAGGCAAAGATCCAGGATAAGGAGGGTATCCCTCCGGACCA 2107 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || |||| || ||||| || || || |||| ||||| ||| |||||||| Sbjct 2106 GCAGCGCCTGATCTTTGCTGGCAAGCAACTCGAGGACGGCCGCACGCTCTCTGACTACAA 2047 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||| ||||||||| | ||||| || || || Sbjct 2046 CATTCAGAAGGAGTCGACGCTCCACCTTGT 2017 >seq2399 Length=624 Score = 109 bits (120), Expect = 6e-19 Identities = 87/105 (83%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 40795 ATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACC 40854 || ||| | |||||||| || || |||| ||||||||| ||||| || |||| |||||| Sbjct 321 ATTCCCCCCGACCAGCAGCGCCTGATCTTCGCGGGCAAGCAGCTCGAGGACGGCCGCACC 380 Query 40855 CTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 |||| |||||||||||||||||||||| |||| || || || ||| Sbjct 381 CTCAGCGACTACAACATCCAGAAGGAGTCCACCCTCCACCTCGTG 425 >seq6239 Length=75403 Score = 93.3 bits (102), Expect = 4e-14 Identities = 84/106 (79%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 40793 GCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCA 40852 |||| ||| | |||||||| || || |||| || ||||| ||||| || || | |||| Sbjct 57596 GCATTCCCCCCGACCAGCAGCGTCTGATCTTTGCCGGCAAGCAGCTTGAGGATGGCCGCA 57537 Query 40853 CCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||| |||||||||||||||||||||| | || || || || || Sbjct 57536 CCCTCAGCGACTACAACATCCAGAAGGAGTCGACCCTCCACCTTGT 57491 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515157064564480