Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000787515.1_202014-11-26] 9,648 sequences; 31,621,284 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq7597 131 1e-25 seq1153 122 6e-23 >seq7597 Length=53330 Score = 131 bits (144), Expect = 1e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 ||||| || || | ||| || || || | || || ||||| |||||||||||||| Sbjct 52294 CCGCCACGGAGACGCAGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 52235 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 ||| ||| |||| ||||||||||| || ||||| ||||| |||||||| || || Sbjct 52234 AGCGTACGCCCGTCCTCCAACTGCTTCCCCGCGAAGATGAGGCGCTGCTGATCCGGAGGG 52175 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||| ||| | | | | |||| |||| || ||||| Sbjct 52174 ATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTGTCGATCGTGTCGGAAGACTCGACC 52115 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| ||| ||||| || || || || || || |||||||||||||| Sbjct 52114 TCCAACGTAATGGTCTTTCCCGTAAGGGTCTTGACAAAGATCTGCAT 52068 Score = 118 bits (130), Expect = 7e-22 Identities = 154/212 (73%), Gaps = 1/212 (0%) Strand=Plus/Minus Query 34179 GCACCA-GGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 |||||| |||| | ||| || ||||| |||||||| ||||||| || | || Sbjct 51770 GCACCAAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAATCGGACAAGGTCCGCCCATCC 51711 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | ||||||||| ||||| || | |||||||| || ||| | || ||||||||| Sbjct 51710 TCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGATCAGGGGGAATGCCCTCCTTGTCC 51651 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||||| | | | || | ||||| |||||||| || | ||||| || Sbjct 51650 TGAATCTTCGCCTTTACGTTGTCGATGGTATCGGAGGATTCGACCTCAAGAGTGATAGTC 51591 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||||||| || |||||||| ||||||||||| Sbjct 51590 TTGCCGGTAAGCGTTTTCACGAAGATCTGCAT 51559 Score = 111 bits (122), Expect = 1e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| |||||||| || |||| |||| |||| |||| |||||| || ||||| Sbjct 52030 TCCTTCTGGATGTTGTAATCCGACAAGGTACGGCCGTCCTCCAGCTGCTTTCCAGCGAAG 51971 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 || || |||||||||||| || | || ||||||||| ||||| ||| | | Sbjct 51970 ATAAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCTTGGATCTTCGCCTTCACGTTA 51911 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | || | ||| | ||| ||||| || | ||||||||| ||||| || | || ||||| Sbjct 51910 TCGATGGTATCCGACGACTCGACCTCAAGCGTGATGGTCTTGCCAGTCAACGTCTTCACG 51851 Query 34379 AAGATCTGCAT 34389 ||||| ||||| Sbjct 51850 AAGATTTGCAT 51840 Score = 89.7 bits (98), Expect = 3e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 ||||| || || | || || || || | ||| || ||||| ||||||||||| || Sbjct 51557 CCGCCACGGAGACGGAGGACAAGATGGAGGGTAGACTCCTTCTGGATGTTGTAGTCTGAG 51498 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || || |||| |||| ||||||||| ||||| || || || ||||||||| || Sbjct 51497 AGGGTGCGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATAAGACGTTGCTGGTCGGGAGGG 51438 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | ||||||||| ||||| ||| | | | | || | || | ||| || || Sbjct 51437 ATACCCTCCTTGTCCTGAATCTTCGCCTTGACGTTGTCAATGGTGTCTGACGACTCAACC 51378 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | ||||| || || || ||||| || || || || |||||||| Sbjct 51377 TCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCAT 51331 >seq1153 Length=45894 Score = 122 bits (134), Expect = 6e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||| || | || || ||||| | || || ||||| ||||||||||| || Sbjct 1771 CCACCGCGTAGACGAAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAA 1830 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 ||| ||| | || || | ||||||||| ||||| ||||| |||||||||||| || Sbjct 1831 AGCGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGCGGG 1890 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | | ||||||||| ||||| ||| | || | | || | || | ||| ||||| Sbjct 1891 ATACCCTCCTTGTCCTGGATCTTCGCCTTCACATTGTCGATGGTGTCCGACGACTCGACC 1950 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | |||||||| |||||||| ||||| || || ||||| ||||| Sbjct 1951 TCGAGAGTGATGGTCTTGCCGGTCAGAGTCTTAACGAAGATTTGCAT 1997 Score = 114 bits (126), Expect = 8e-21 Identities = 155/212 (73%), Gaps = 3/212 (1%) Strand=Plus/Plus Query 34180 CACCA-GGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC-AGCTGACGGTCGTCG 34237 ||||| |||| | || || || ||||| ||||||||||||||| || || || | || Sbjct 2303 CACCAAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGACAAGGTG-CGACCATCC 2361 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | ||||||||| ||||| || || |||||||||||| || | || ||||||||| Sbjct 2362 TCAAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCC 2421 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | | | | |||| |||| || ||||| || | |||||||| Sbjct 2422 TGAATCTTCGCCTTCACGTTGTCGATCGTGTCGGAAGACTCGACCTCGAGAGTGATGGTC 2481 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || || || | || || |||||||||||||| Sbjct 2482 TTCCCCGTCAACGTCTTGACAAAGATCTGCAT 2513 Score = 114 bits (126), Expect = 8e-21 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 34184 AGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAAC 34243 ||||| | ||| || || ||||| ||||| || ||||| || ||| | || |||| Sbjct 2587 AGGTGGAGAGTGCTCTCCTTCTGAATGTTATAATCGGAGAGGGTACGACCATCCTCCAGT 2646 Query 34244 TGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATC 34303 |||||||| || || ||||| ||||||||||| || | | ||||||||| ||| Sbjct 2647 TGCTTGCCAGCAAAGATGAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTGGATC 2706 Query 34304 TTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCG 34363 || ||| | || | | || | || | ||| ||||| || | |||||||| |||||| Sbjct 2707 TTAGCCTTCACATTGTCGATGGTGTCCGACGACTCGACCTCGAGGGTGATGGTCTTGCCG 2766 Query 34364 GTGAGAGTTTTCACAAAGATCTGCAT 34389 || | ||| || |||||||||||||| Sbjct 2767 GTCAAAGTCTTGACAAAGATCTGCAT 2792 Score = 96.9 bits (106), Expect = 2e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| ||||||||||| || ||| ||| |||| || | |||||||| || || Sbjct 2035 TCCTTCTGAATGTTGTAGTCAGAGAGCGTGCGGCCGTCCTCGAGTTGCTTGCCAGCAAAG 2094 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 || || ||||||||||| || | | |||||| || |||||| ||| | | | Sbjct 2095 ATCAGGCGCTGCTGGTCCGGAGGGATACCCTCCTTATCCTGGATCTTTGCCTTGACGTTG 2154 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | || | ||| | |||||| || |||| ||||| || || || ||||| || || || Sbjct 2155 TCGATTGTATCCGACGATTCAACCTCCAAGGTGATCGTCTTACCCGTGAGGGTCTTGACG 2214 Query 34379 AAGATCTGCAT 34389 ||||| ||||| Sbjct 2215 AAGATTTGCAT 2225 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323034011578880