Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000787515.1_202014-11-26] 9,648 sequences; 31,621,284 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq38 84.2 5e-11 >seq38 Length=96116 Score = 84.2 bits (92), Expect = 5e-11 Identities = 139/198 (70%), Gaps = 7/198 (4%) Strand=Plus/Minus Query 157253 TTGCTGTACTCGGCCACTCTATTCTCAAAAAAGTTGGTCTTTCCCTGGAGAGAAATCATG 157312 |||| |||||||| || | ||||| || ||||||||||| |||||||| || || | | Sbjct 72993 TTGC-GTACTCGGAGACGCGTTTCTCGAAGAAGTTGGTCTTGCCCTGGAGCGAGATGAGG 72935 Query 157313 TCCATCCACTCGAATGGGT---TGGCGCAGTTGTACACCTTGTCGTACCCCAGCTGGTTC 157369 ||||| | ||||| |||| |||||| || || ||| |||| ||| ||| | Sbjct 72934 TCCATGAAGTCGAACGGGTTCGTGGCGCGGTAGT---GCTTCTCGTTCCCGAGCGCGACG 72878 Query 157370 AGCCAGTAGTCCGCCACAAACTTGATGTACTCTGTCATGCTCTTCTCGCTGATACCGATG 157429 ||| |||||| || |||| ||| |||| |||| | || | || |||||| Sbjct 72877 AGCAGACGGTCCGCTACGAACTCGATATACTGGCACATGAGGTCGGCGTTCATGCCGATG 72818 Query 157430 AGCGCGACGGGAAGCGCC 157447 |||| ||| || |||||| Sbjct 72817 AGCGAGACCGGCAGCGCC 72800 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073633666366464