Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000787515.1_202014-11-26] 9,648 sequences; 31,621,284 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq38 185 8e-42 seq5619 134 1e-26 seq7597 105 6e-18 seq1153 105 6e-18 >seq38 Length=96116 Score = 185 bits (204), Expect = 8e-42 Identities = 445/664 (67%), Gaps = 27/664 (4%) Strand=Plus/Minus Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629 |||||| | |||||||| ||||| || || || || ||||| | ||| || | ||||| Sbjct 70604 ATTTGGCAGATGTACAAGAAGGCTGAGGCTTCATTCTGGACTGCCGAGGAGATGGACCTT 70545 Query 57630 TCTAAGGATCTGAGCGATTGGGATTCCC---TCAAAGAATCTGAGAGAAATTTTATTAAA 57686 || ||||| || ||||||| | || |||| || |||| | |||| || Sbjct 70544 TCCAAGGACCTCCACGATTGGAACAACCGCCTCAACGACGATGAGCGTCATTTCATCTCG 70485 Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746 |||||| | || || ||||| || || || || || || |||||||| | ||||| | Sbjct 70484 CACGTGCTCGCCTTCTTCGCTGCCTCGGACGGCATCGTGAACGAGAACCTTGTCGAGCGG 70425 Query 57747 TTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATT 57806 || || | || || || | | ||||| | ||||| ||||| || || | || Sbjct 70424 TTCTCCAATGAGGTCCAGGCCGCCGAGGCACGCTGCTTCTACGGCTTCCAGATCATGATG 70365 Query 57807 GAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGA---CAAC 57863 || ||| | || || || | || ||||| |||||||| |||||| | ||||| ||| Sbjct 70364 GAGAACATCCACTCGGAGACATACTCGCTGCTCATCGACACGTACATCAAGGATCCCAAG 70305 Query 57864 GA-CGAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGC 57922 | || || | | || ||| |||| ||||| || || || ||| |||||||| Sbjct 70304 CAGCGCGA---GCAC-CTTTTCGACGCCATCGAGACGATTCCTTGCATCAAGAAGAAGGC 70249 Query 57923 AGAGTGGTCAATCAAATGGATAAAAAGCGCCACGG---CCACGTTCGCCGAGAGGCTAAT 57979 || ||| | | | ||||| | || || || | ||||| ||| |||| | Sbjct 70248 GGACTGGGCTTTGCACTGGATCTCT---GACAAGGAGTCCGCCTTCGCGGAGCGGCTCGT 70192 Query 57980 CGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGAT 58039 || ||||| || || || ||||| ||||| || || |||||| | || || ||| | Sbjct 70191 GGCTTTCGCGGCTGTGGAGGGTATCTTCTTCTCTGGTTCCTTTGCCTCCATCTTCTGGCT 70132 Query 58040 GAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGA 58099 ||||| ||||||||||||||||| || ||||| ||| ||| | || ||||| ||||| Sbjct 70131 CAAGAAGCGCGGCCTGATGCCCGGTCTCACGTTCTCCAATGAGCTTATCTCGCGTGACGA 70072 Query 58100 GGGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATA----AACCGA 58155 ||| | || || || || |||||| | | | | ||| | |||| | || | Sbjct 70071 GGGCATGCACACCGACTTCGCGTGCTTGCTTTTCAGTCA---TCTCAAGAGGCGCCCCCA 70015 Query 58156 CGCGG-GATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTC 58214 | ||| ||| |||| | || ||||| ||||||||||| ||||| | ||||| | Sbjct 70014 CCCGGAGAT--CATCCGTCAAATCATCACTGAGGCGGTCGCTATCGAGCAGGAGTTCTTG 69957 Query 58215 ACCG 58218 |||| Sbjct 69956 ACCG 69953 Score = 159 bits (176), Expect = 3e-34 Identities = 380/566 (67%), Gaps = 15/566 (3%) Strand=Plus/Plus Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629 || ||| | |||||||| || || |||| ||||| ||||||||||| || | |||| Sbjct 72090 ATATGGCAGATGTACAAGAACGCCCAAGCGTCGTTCTGGACCGTCGAGGAGATCAACCTC 72149 Query 57630 TCTAAGGATCTGAGCGATTGGGATTCC---CTCAAAGAATCTGAGAGAAATTTTATTAAA 57686 | || || || | || ||| | | | ||||| | | ||| | | || || Sbjct 72150 GCCAACGACCTCATGGACTGGAACTACAAGCTCAACGCAAACGAGCGCCACTTCATCTCC 72209 Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746 ||||| | || || |||||||| || || || || || ||||||||| | ||||| | Sbjct 72210 TACGTGCTTGCTTTCTTCGCCGCCTCGGACGGCATCGTGAACGAGAATCTCGTCGAGCGG 72269 Query 57747 TTTTCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATT 57806 || || | || || || | | |||||| | |||||||| || || || | || Sbjct 72270 TTCTCTAACGAGGTACAGGCCGCCGAGGCGCGCTGCTTTTATGGCTTCCAGATCATGATC 72329 Query 57807 GAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACG-- 57864 || || ||||| || || | ||| ||||| |||||||| ||||| | |||||| || Sbjct 72330 GAGAATGTGCACTCGGAGACGTACTCGCTGCTCATCGACACGTATATCAAGGACCCCGCT 72389 Query 57865 --ACGAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCG-ATCGCCAAGAAGG 57921 ||| | ||| |||||| |||| ||||| || || |||| | ||| ||||||| Sbjct 72390 GAACGCG---CGT-TCCTGTTCGACGCCATCGACACCAT-CCCGTGTATCCGTAAGAAGG 72444 Query 57922 CAGAGTGGTCAATCAAATGGATAAAAAGCGCCACGGCCA-CGTTCGCCGAGAGGCTAATC 57980 | || ||| | | ||||| | || || || ||| || |||||||| || Sbjct 72445 CGGACTGGGCGTTGCGCTGGATTGAGGACG-AGCGTTCAGTGTTTGCGGAGAGGCTGGTC 72503 Query 57981 GCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATG 58040 || || || || ||||| || | ||||| || || || || || || || ||| || Sbjct 72504 GCATTTGCGGCAGTCGAGGGCGTGTTCTTCTCCGGGTCGTTCGCCGCCATTTTCTGGCTG 72563 Query 58041 AAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAG 58100 ||||| || || ||||||| || ||||||| |||||| | || || |||||| Sbjct 72564 AAGAAGCGGGGGTTGATGCCGGGGTTGACGTTCTCTAACGAGCTTATCAGCCGAGACGAG 72623 Query 58101 GGTCTCCATACTGATTTTGCGTGCCT 58126 ||| | || || || |||||||| || Sbjct 72624 GGTATGCACACCGACTTTGCGTGTCT 72649 >seq5619 Length=11060 Score = 134 bits (148), Expect = 1e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 23357 AAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCG 23416 ||||| || || | ||| ||||||||||| | || || || ||||| || |||||||| Sbjct 2858 AAAAGGTCGGGCACCCAGAGAGCGTAGAATAAGTCACGTGCACGCACTTCTTCTTTGCCA 2917 Query 23417 GTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACG 23476 |||||| | || | || || || ||||| ||||||| ||||||| ||| ||| Sbjct 2918 TGGTTCTTACGAAGGTCAAGGAATTCAAAGACGTCTCCATGCCATGGCTCGACGTAGACG 2977 Query 23477 GCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTAC 23536 ||||| || || |||| || ||||| ||||||||||| || || || ||| || | || Sbjct 2978 GCAAAAGCTCCGGGTCGTTTGTTGCCACCCTGATCGACATAGCGAGCGGTGGCGTCGAAC 3037 Query 23537 ACTCTTAGCATCGGCACGAGACCGTTGGA 23565 || | |||||||||||| | ||||| || Sbjct 3038 ACGCGTAGCATCGGCACAATGCCGTTTGA 3066 >seq7597 Length=53330 Score = 105 bits (116), Expect = 6e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||| ||||| ||||| |||| ||||| || ||||| | || || || |||| Sbjct 51839 CATGCAAATCTTCGTGAAGACGTTGACTGGCAAGACCATCACGCTTGAGGTCGAGTCGTC 51898 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 || | |||| | || || || || |||||||| ||| | || |||||||| Sbjct 51899 GGATACCATCGATAACGTGAAGGCGAAGATCCAAGACAAGGAGGGCATCCCTCCCGACCA 51958 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||||||| || |||||||| || ||| |||| ||| || || ||||| || Sbjct 51959 GCAGCGTCTTATCTTCGCTGGAAAGCAGCTGGAGGACGGCCGTACCTTGTCGGATTACAA 52018 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||| || || || ||||| ||||| |||| || Sbjct 52019 CATCCAGAAGGAGTCGACCCTTCACTTGGTCCT 52051 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| |||||||| ||||| || || || || ||||||||| | || ||||| |||| Sbjct 51330 CATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTTGAGTCGTC 51389 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | || | ||||| || || ||||||||| || | || |||||||| Sbjct 51390 AGACACCATTGACAACGTCAAGGCGAAGATTCAGGACAAGGAGGGTATCCCTCCCGACCA 51449 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||| ||||| || ||||| ||||| ||| |||| ||| || | || || || Sbjct 51450 GCAACGTCTTATCTTCGCCGGCAAGCAGCTGGAGGACGGACGCACCCTCTCAGACTACAA 51509 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||| || || || || || || ||||| || || | || | ||||||| Sbjct 51510 CATCCAGAAGGAGTCTACCCTCCATCTTGTCCTCCGTCTCCGTGGCGGTA 51559 Score = 84.2 bits (92), Expect = 2e-11 Identities = 142/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| || || || || ||||| || ||||| | || || ||| | ||| Sbjct 51559 ATGCAGATCTTCGTGAAAACGCTTACCGGCAAGACTATCACTCTTGAGGTCGAATCCTCC 51618 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | |||| | || || || || ||||||||| ||| | || || || ||| Sbjct 51619 GATACCATCGACAACGTAAAGGCGAAGATTCAGGACAAGGAGGGCATTCCCCCTGATCAG 51678 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| | || ||||||||||| ||| | || || ||| || |||||| ||| Sbjct 51679 CAGCGCTTGATCTTCGCTGGCAAGCAGCTTGAGGATGGGCGGACCTTGTCCGATTACAAC 51738 Query 31373 ATTCAAAAAGAATCGACTCTTCATCT 31398 || || || || || ||||| || || Sbjct 51739 ATCCAGAAGGAGTCCACTCTCCACCT 51764 >seq1153 Length=45894 Score = 105 bits (116), Expect = 6e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| ||||||||||| ||||| || ||||| |||| || || |||| Sbjct 1997 ATGCAAATCTTCGTTAAGACTCTGACCGGCAAGACCATCACTCTCGAGGTCGAGTCGTCG 1938 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || || || ||||||||| || | |||||||||||| Sbjct 1937 GACACCATCGACAATGTGAAGGCGAAGATCCAGGACAAGGAGGGTATCCCGCCCGACCAG 1878 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || ||||| ||||| ||| | || || || | || || ||| Sbjct 1877 CAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACGCTTTCGGACTACAAC 1818 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 || || || || ||||| ||||| || || ||| Sbjct 1817 ATCCAGAAGGAGTCGACCCTTCACCTCGTCCTT 1785 Score = 96.9 bits (106), Expect = 3e-15 Identities = 115/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || || || ||||| |||| || || || ||||| |||| || || | || Sbjct 2514 CATGCAGATCTTTGTCAAGACGTTGACGGGGAAGACCATCACTCTCGAGGTCGAGTCTTC 2455 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| |||| | || || || || ||||||||| ||| | ||||||||||| Sbjct 2454 CGACACGATCGACAACGTGAAGGCGAAGATTCAGGACAAGGAGGGCATCCCGCCCGACCA 2395 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 ||||||||| || ||||||||||| ||| | || || Sbjct 2394 GCAGCGTCTGATCTTCGCTGGCAAGCAGCTTGAGGA 2359 Score = 93.3 bits (102), Expect = 4e-14 Identities = 148/211 (70%), Gaps = 1/211 (0%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || || || |||||| |||| ||||| || |||||| |||| || || |||| Sbjct 2792 ATGCAGATCTTTGTCAAGACTTTGACCGGCAAGACCATCACCCTCGAGGTCGAGTCGTCG 2733 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || | || ||||||||| || | || || |||||| Sbjct 2732 GACACCATCGACAATGTGAAGGCTAAGATCCAGGACAAGGAGGGTATCCCTCCTGACCAG 2673 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || || |||||||| || |||| || | || | |||||||||| Sbjct 2672 CAGCGTCTCATCTTTGCTGGCAAGCAACTGGAGGATGGTCGTACCCTCTCCGATTATAAC 2613 Query 31373 ATTCAAAAAGAATCGACTCTTCATCT-GGTA 31402 ||||| || || ||||| || || |||| Sbjct 2612 ATTCAGAAGGAGAGCACTCTCCACCTCGGTA 2582 Score = 89.7 bits (98), Expect = 5e-13 Identities = 149/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| ||||| || || || || ||||||||| | || |||||| |||| Sbjct 2225 ATGCAAATCTTCGTCAAGACCCTCACGGGTAAGACGATCACCTTGGAGGTTGAATCGTCG 2166 Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 || | |||| | ||||| || ||| | ||| ||||| || | || || ||||| Sbjct 2165 GATACAATCGACAACGTCAAGGCAAAGA-TCCAGGATAAGGAGGGTATCCCTCCGGACCA 2107 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||| || || || |||||||| || | || ||| || | || || || Sbjct 2106 GCAGCGCCTGATCTTTGCTGGCAAGCAACTCGAGGACGGCCGCACGCTCTCTGACTACAA 2047 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 |||||| || || ||||| || || || || || Sbjct 2046 CATTCAGAAGGAGTCGACGCTCCACCTTGTCCT 2014 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445712640572160