Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000787515.1_202014-11-26] 9,648 sequences; 31,621,284 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq7597 84.2 2e-11 >seq7597 Length=53330 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/212 (70%), Gaps = 3/212 (1%) Strand=Plus/Minus Query 42900 CACCAAA-TGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGT 42958 |||||| |||| |||| |||||| || | |||||||||||||| || || | || | Sbjct 51769 CACCAAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAATCGGACAAGGTCCGCCCATCCT 51710 Query 42959 CCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGC 43018 | | || ||||| || || ||||| ||||| ||||| | || | || || || || | Sbjct 51709 CAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGATCAGGGGGAATGCCCTCCTTGTC-C 51651 Query 43019 TG-ATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTT 43077 || ||| | | || || || | | || ||| | ||||| || | || ||||| Sbjct 51650 TGAATCTTCGCCTTTACGTTGTCGATGGTATCGGAGGATTCGACCTCAAGAGTGATAGTC 51591 Query 43078 TTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || ||||| || |||||||| || || ||||| Sbjct 51590 TTGCCGGTAAGCGTTTTCACGAAGATCTGCAT 51559 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381324756655584