Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000787515.1_202014-11-26] 9,648 sequences; 31,621,284 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq2039 89.7 3e-13 >seq2039 Length=45597 Score = 89.7 bits (98), Expect = 3e-13 Identities = 121/169 (72%), Gaps = 0/169 (0%) Strand=Plus/Minus Query 25801 CTCCACTGGAACCCGTACACCGGTCCTAGGTCTCCATCTTCCCTGTGCTCAAAGCCCCTC 25860 ||||| |||||||| ||||| || |||||||| || ||| || || | || || | | Sbjct 8439 CTCCATTGGAACCCATACACGGGCCCTAGGTCGCCCTCTCGCCGATGTCCTAAACCACGC 8380 Query 25861 TTATCCAAAAAGTCTCTGGAACCATTGGCGTCCCAGATCTTTACCCCCTTCTCGGAGAGC 25920 || || | || || | || || || | ||||||||||| | ||||||| |||| ||| Sbjct 8379 TTCTCGAGGAACTCCTTCGAGCCGTTACCATCCCAGATCTTGATCCCCTTCGCGGACAGC 8320 Query 25921 TCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCGCCGTGA 25969 | |||||||| ||| | || | | ||||| | |||||| | |||| Sbjct 8319 TGTTTGGAGTCCGTGCATCCGCGTATAAACCATAAGAGCTCCTCAGTGA 8271 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340097604920304