Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000787515.1_202014-11-26] 9,648 sequences; 31,621,284 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq5619 91.5 4e-13 >seq5619 Length=11060 Score = 91.5 bits (100), Expect = 4e-13 Identities = 166/239 (69%), Gaps = 3/239 (1%) Strand=Plus/Minus Query 363736 TACATTCGC-GGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGA 363794 ||||| ||| |||||| || ||||| || || | || || ||||| || ||||| || Sbjct 3090 TACAT-CGCTGGCACAAACGGTTACTCAAACGGCATTGTGCCGATGCTACGCGTGTTCGA 3032 Query 363795 CAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTA 363854 | || || | || ||||| |||||||| || || || || ||||| | || Sbjct 3031 CGCCACCGCTCGCTATGTCGATCAGGGTGGCAACAAACGACCCGGAGCTTTTGCCGTCTA 2972 Query 363855 TCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAA 363914 ||||||| |||| || | ||||| || ||||| || || || ||| || || Sbjct 2971 CGTCGAGCCATGGCATGGAGACGTCTTTGAATTCCTTGACCTTCGTAAGAACCATGGCAA 2912 Query 363915 AGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGA 363973 ||| ||| ||||||||||||| | ||||| || || ||||| | |||| |||| ||| Sbjct 2911 AGAAGAAGTGCGTGCACGTGACTTATTCTACGCTCTCTGGGTGCCCGACC-TTTTGTGA 2854 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303192485944736