Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000787515.1_202014-11-26] 9,648 sequences; 31,621,284 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq7597 134 1e-26 seq1153 122 8e-23 seq2399 104 2e-17 seq6239 87.8 2e-12 >seq7597 Length=53330 Score = 134 bits (148), Expect = 1e-26 Identities = 169/232 (73%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| ||||| || || || || || | |||||||||||| || ||||||||||| Sbjct 52067 GCCACCACGCAAGCGGAGGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGA 52008 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || ||| || |||||| |||||||| || ||| |||| | |||||||||||| ||||| Sbjct 52007 CAAGGTACGGCCGTCCTCCAGCTGCTTTCCAGCGAAGATAAGACGCTGCTGGTCGGGAGG 51948 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || || ||||| ||| ||| ||| | | || | ||||| | ||||||| Sbjct 51947 GATGCCCTCCTTGTCTTGGATCTTCGCCTTCACGTTATCGATGGTATCCGACGACTCGAC 51888 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGACT 131238 || | || | ||| || || || | || || ||||| || |||||| || Sbjct 51887 CTCAAGCGTGATGGTCTTGCCAGTCAACGTCTTCACGAAGATTTGCATGCCT 51836 Score = 125 bits (138), Expect = 7e-24 Identities = 165/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || || | |||||| || | ||| | ||| |||||||| || |||||||| ||| Sbjct 52295 GCCGCCACGGAGACGCAGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 52236 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | || ||| |||||| | |||||| || ||| |||| | |||||||| |||||||| Sbjct 52235 GAGCGTACGCCCGTCCTCCAACTGCTTCCCCGCGAAGATGAGGCGCTGCTGATCCGGAGG 52176 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || || ||||| ||| ||| ||||| | || | || |||| ||||||| Sbjct 52175 GATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTGTCGATCGTGTCGGAAGACTCGAC 52116 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | |||| ||| || || || || || || || || ||||||||| Sbjct 52115 CTCCAACGTAATGGTCTTTCCCGTAAGGGTCTTGACAAAGATCTGCATG 52067 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || || | ||| || || | ||| | ||| |||||||| || |||||||| || Sbjct 51557 CCGCCACGGAGACGGAGGACAAGATGGAGGGTAGACTCCTTCTGGATGTTGTAGTCTGAG 51498 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| |||||| ||||||||||| ||| |||| | ||| |||||||| |||||| Sbjct 51497 AGGGTGCGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATAAGACGTTGCTGGTCGGGAGGG 51438 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| || ||| ||||| | || | || || | ||||| | Sbjct 51437 ATACCCTCCTTGTCCTGAATCTTCGCCTTGACGTTGTCAATGGTGTCTGACGACTCAACC 51378 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | ||| | || || || || || || || ||||||||||||||| Sbjct 51377 TCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCATG 51330 Score = 116 bits (128), Expect = 3e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 || |||||||| || |||||||||||| || ||| ||| ||||| ||||||||||| Sbjct 51755 GTGGACTCCTTCTGGATGTTGTAATCGGACAAGGTCCGCCCATCCTCAAGCTGCTTGCCA 51696 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157 ||| |||| || |||||||| || || || || || || ||||| || ||| ||| Sbjct 51695 GCGAAGATCAAGCGCTGCTGATCAGGGGGAATGCCCTCCTTGTCCTGAATCTTCGCCTTT 51636 Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217 | | || | ||||||| ||| |||| || | || | || || ||||| || ||| Sbjct 51635 ACGTTGTCGATGGTATCGGAGGATTCGACCTCAAGAGTGATAGTCTTGCCGGTAAGCGTT 51576 Query 131218 TTTACGAAAATCTGCAT 131234 || ||||| |||||||| Sbjct 51575 TTCACGAAGATCTGCAT 51559 >seq1153 Length=45894 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||| | ||| || || | || | |||||||||||| || |||||||| || Sbjct 1771 CCACCGCGTAGACGAAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAA 1830 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| ||||||||||| ||| |||| | ||||||||||| || ||| Sbjct 1831 AGCGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGCGGG 1890 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| ||| ||| | | || | || || | ||||||| Sbjct 1891 ATACCCTCCTTGTCCTGGATCTTCGCCTTCACATTGTCGATGGTGTCCGACGACTCGACC 1950 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | ||| || ||||| ||||| || ||||| || ||||| Sbjct 1951 TCGAGAGTGATGGTCTTGCCGGTCAGAGTCTTAACGAAGATTTGCAT 1997 Score = 105 bits (116), Expect = 6e-18 Identities = 139/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 131043 CTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTA 131102 |||||| || |||||||| ||| || |||||| ||||| ||||||||||| ||| | Sbjct 2322 CTCCTTCTGGATGTTGTAGTCGGACAAGGTGCGACCATCCTCAAGCTGCTTGCCAGCGAA 2381 Query 131103 GATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTG 131162 ||| | |||||||||||| || ||||| || || ||||| || ||| ||| | | Sbjct 2382 GATCAGACGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGAATCTTCGCCTTCACGTT 2441 Query 131163 CTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTAC 131222 || | || |||| ||||||| |||| || | ||| || || || | || || || Sbjct 2442 GTCGATCGTGTCGGAAGACTCGACCTCGAGAGTGATGGTCTTCCCCGTCAACGTCTTGAC 2501 Query 131223 GAAAATCTGCATG 131235 || ||||||||| Sbjct 2502 AAAGATCTGCATG 2514 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 131043 CTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTA 131102 |||||| |||||||| |||||| | ||| || ||||| || |||||||| || | Sbjct 2601 CTCCTTCTGAATGTTATAATCGGAGAGGGTACGACCATCCTCCAGTTGCTTGCCAGCAAA 2660 Query 131103 GATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTG 131162 ||| | |||||||||||| |||||||| || || ||||| ||| || ||| | | Sbjct 2661 GATGAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTGGATCTTAGCCTTCACATT 2720 Query 131163 CTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTAC 131222 || | || || | ||||||| |||| ||| | ||| || ||||| | ||| || || Sbjct 2721 GTCGATGGTGTCCGACGACTCGACCTCGAGGGTGATGGTCTTGCCGGTCAAAGTCTTGAC 2780 Query 131223 GAAAATCTGCAT 131234 || |||||||| Sbjct 2781 AAAGATCTGCAT 2792 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 ||||||||||| ||||||||||| || | ||||| |||||| || |||||||| Sbjct 2029 GTCGACTCCTTCTGAATGTTGTAGTCAGAGAGCGTGCGGCCGTCCTCGAGTTGCTTGCCA 2088 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157 || |||| | |||||||||||||||||||| || || || || ||| || |||| Sbjct 2089 GCAAAGATCAGGCGCTGCTGGTCCGGAGGGATACCCTCCTTATCCTGGATCTTTGCCTTG 2148 Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217 | | || | ||||| | || || | || | ||| | || ||||| || || || Sbjct 2149 ACGTTGTCGATTGTATCCGACGATTCAACCTCCAAGGTGATCGTCTTACCCGTGAGGGTC 2208 Query 131218 TTTACGAAAATCTGCAT 131234 || ||||| || ||||| Sbjct 2209 TTGACGAAGATTTGCAT 2225 >seq2399 Length=624 Score = 104 bits (114), Expect = 2e-17 Identities = 96/122 (79%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||| ||||| | || | ||| |||||||| || |||||||| ||||| Sbjct 442 CCACCACGCAGACGAAGCACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTG 383 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| |||||| ||||||||||| ||| |||| | ||||||||||| || || Sbjct 382 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCCGCGAAGATCAGGCGCTGCTGGTCGGGGGGA 323 Query 131128 AT 131129 || Sbjct 322 AT 321 >seq6239 Length=75403 Score = 87.8 bits (96), Expect = 2e-12 Identities = 75/93 (81%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 131037 GGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCC 131096 |||||||||||| || |||||||| ||||| | |||||| ||||| ||||||||||| Sbjct 57502 GGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGGCCATCCTCAAGCTGCTTGCC 57561 Query 131097 TGCGTAGATTAAACGCTGCTGGTCCGGAGGGAT 131129 || |||| | |||||||||||| || || || Sbjct 57562 GGCAAAGATCAGACGCTGCTGGTCGGGGGGAAT 57594 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471955875256320