Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000787515.1_202014-11-26] 9,648 sequences; 31,621,284 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq1153 120 3e-22 >seq1153 Length=45894 Score = 120 bits (132), Expect = 3e-22 Identities = 141/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| |||||||||||||| || ||||||| |||| || |||||||| Sbjct 2792 ATGCAGATCTTTGTCAAGACTTTGACCGGCAAGACCATCACCCTCGAGGTCGAGTCGTCG 2733 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| ||||| ||||| || ||| ||||| || || || || |||||||| Sbjct 2732 GACACCATCGACAATGTGAAGGCTAAGATCCAGGACAAGGAGGGTATCCCTCCTGACCAG 2673 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || ||||| ||||| ||| | || |||| ||| || | |||||| || Sbjct 2672 CAGCGTCTCATCTTTGCTGGCAAGCAACTGGAGGATGGTCGTACCCTCTCCGATTATAAC 2613 Query 25179 ATTCAAAAAGA 25189 ||||| || || Sbjct 2612 ATTCAGAAGGA 2602 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433277047127120