Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000787515.1_202014-11-26] 9,648 sequences; 31,621,284 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq1153 111 1e-19 seq7597 107 2e-18 >seq1153 Length=45894 Score = 111 bits (122), Expect = 1e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 114192 TCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAG 114251 || || |||||||| |||||| | |||||| ||| || ||||| || ||||| || Sbjct 2602 TCCTTCTGAATGTTATAATCGGAGAGGGTACGACCATCCTCCAGTTGCTTGCCAGCAAAG 2661 Query 114252 ATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGT 114311 ||||||||||| ||||| ||||| || || || ||||| ||||| || | | Sbjct 2662 ATGAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTGGATCTTAGCCTTCACATTG 2721 Query 114312 TCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACA 114371 || | |||||| | || ||||| || | ||| | || |||||||||| ||| || ||| Sbjct 2722 TCGATGGTGTCCGACGACTCGACCTCGAGGGTGATGGTCTTGCCGGTCAAAGTCTTGACA 2781 Query 114372 AAAATCTGCAT 114382 || |||||||| Sbjct 2782 AAGATCTGCAT 2792 >seq7597 Length=53330 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || || || || |||||||||||| || || || ||| ||||| || || ||| Sbjct 51755 GTGGACTCCTTCTGGATGTTGTAATCGGACAAGGTCCGCCCATCCTCAAGCTGCTTGCCA 51696 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| |||| | ||||| || || || |||||||| || ||||| |||||| ||| Sbjct 51695 GCGAAGATCAAGCGCTGCTGATCAGGGGGAATGCCCTCCTTGTCCTGAATCTTCGCCTTT 51636 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | ||| |||| ||||||||| || | || | || |||||||| || ||| Sbjct 51635 ACGTTGTCGATGGTATCGGAGGATTCGACCTCAAGAGTGATAGTCTTGCCGGTAAGCGTT 51576 Query 114366 TTTACAAAAATCTGCAT 114382 || || || |||||||| Sbjct 51575 TTCACGAAGATCTGCAT 51559 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||||||||| || | | || | ||| | ||||| || || || |||||||| || Sbjct 51560 ATACCGCCACGGAGACGGAGGACAAGATGGAGGGTAGACTCCTTCTGGATGTTGTAGTCT 51501 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || || || || || || || || ||| |||| ||||| || ||||| ||| Sbjct 51500 GAGAGGGTGCGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATAAGACGTTGCTGGTCGGGA 51441 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || || || ||||| |||||| || | | |||| |||||| | || || Sbjct 51440 GGGATACCCTCCTTGTCCTGAATCTTCGCCTTGACGTTGTCAATGGTGTCTGACGACTCA 51381 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || || | ||| | ||| || || || || || || || |||||||||||| Sbjct 51380 ACCTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCATG 51330 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420084998496576