Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000787515.1_202014-11-26] 9,648 sequences; 31,621,284 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq7597 87.8 1e-12 >seq7597 Length=53330 Score = 87.8 bits (96), Expect = 1e-12 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGC 33969 || ||||| || ||||| || ||| ||||||||| |||||||| || | | ||| Sbjct 52285 AGACGCAGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGCGTACGC 52226 Query 33970 TCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTCT 34029 |||| ||||| ||||| || || || || ||||||||||||||| || | || ||| Sbjct 52225 CCGTCCTCCAACTGCTTCCCCGCGAAGATGAGGCGCTGCTGATCCGGAGGGATGCCCTCC 52166 Query 34030 TTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGATTCGCATTCGACCGTT 34089 |||||| || || ||| | | | | || | ||| ||| || | ||| Sbjct 52165 TTGTCCTGGATCTTCGCCTTGACGTTGTCGATCGTGTCGGAAGACTCGACCTCCAACGTA 52106 Query 34090 ATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127 || || ||||| || || || || |||||||| ||||| Sbjct 52105 ATGGTCTTTCCCGTAAGGGTCTTGACAAAGATCTGCAT 52068 Score = 86.0 bits (94), Expect = 5e-12 Identities = 147/212 (69%), Gaps = 1/212 (0%) Strand=Plus/Minus Query 33917 GCACCA-GATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGCTCGTCG 33975 |||||| | || || ||| ||||||||| ||||||||||| | ||| ||| | || Sbjct 51770 GCACCAAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAATCGGACAAGGTCCGCCCATCC 51711 Query 33976 TCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTCTTTGTCC 34035 || | |||||||| || || |||| |||||||||||| || | || ||| |||||| Sbjct 51710 TCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGATCAGGGGGAATGCCCTCCTTGTCC 51651 Query 34036 ATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGATTCGCATTCGACCGTTATTGTT 34095 ||| || ||| | | | |||| | |||||| || | || || || Sbjct 51650 TGAATCTTCGCCTTTACGTTGTCGATGGTATCGGAGGATTCGACCTCAAGAGTGATAGTC 51591 Query 34096 TTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127 || ||||| || |||||||| ||||| ||||| Sbjct 51590 TTGCCGGTAAGCGTTTTCACGAAGATCTGCAT 51559 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397015711417696