Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000787515.1_202014-11-26] 9,648 sequences; 31,621,284 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq38 149 7e-31 >seq38 Length=96116 Score = 149 bits (164), Expect = 7e-31 Identities = 344/508 (68%), Gaps = 19/508 (4%) Strand=Plus/Plus Query 126065 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTC 126124 ||||||||||| ||||| || ||||| ||||| || || ||||| || || |||||| Sbjct 70069 CCCTCGTCACGCGAGATAAGCTCATTGGAGAACGTGAGACCGGGCATCAGGCCGCGCTTC 70128 Query 126125 TTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACACGCGAAC 126184 || | |||||| || | ||| ||||| ||||||||||| ||||||||| |||||| Sbjct 70129 TTGAGCCAGAAGATGGAGGCAAAGGAACCAGAGAAGAAGATACCCTCCACAGCCGCGAAA 70188 Query 126185 GCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTCA---AACCACTTCATCGCCCAC 126241 || | ||| ||||| || |||| | |||| ||||| | ||| | || ||||| Sbjct 70189 GCCACGAGCCGCTCCGCGAAGGCG---GACTCCTTGTCAGAGATCCAGTGCAAAGCCCAG 70245 Query 126242 TGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCT-TCTTTTC 126300 | |||||| |||| ||| || || | |||| ||| || || || || | || | | | Sbjct 70246 TCCGCCTTCTTCTTGATGCAAGGAATCGTCTCGATGGCGTCGAAAAGGTGCTCGCGCTGC 70305 Query 126301 TGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCGTGGACCAT-TT 126359 | ||||| ||||||||| | || ||||| || ||||| || ||||| | | Sbjct 70306 T-TGGGATCCTTGATGTACGTGTCGATGAGCAGCGAGTATGTCTCCGAGTGGATGTTCTC 70364 Query 126360 CATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCATCGGCAA 126419 ||| || | ||| | ||||||| |||| || ||| ||| ||||||| || | Sbjct 70365 CATCAT-GATCTGGAAGCCGTAGAAGCAGCGTGCCTCGGCGGCCTGGACCTCATTGG-AG 70422 Query 126420 AATTGTTATTGATA---TTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCCAGGA 126476 || | | || | ||||| || || || || || |||| || || || || | Sbjct 70423 AACCG--CTCGACAAGGTTCTCGTTCACGATGCCGTCCGAGGCAGCGAAGAAGGCGAGCA 70480 Query 126477 TATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCAAGATCCT 126533 | | ||||| | | |||| ||||| | || | ||||| |||| || |||| Sbjct 70481 CGTGCGAGATGAAATGACGCTCATCGTCGTTGAGGCGGTTGTTCCAATCGTGGAGGTCCT 70540 Query 126534 TCGAGAGATCTACCTCCTCCGCAGTCCA 126561 | || || || | |||||| |||||||| Sbjct 70541 TGGAAAGGTCCATCTCCTCGGCAGTCCA 70568 Score = 95.1 bits (104), Expect = 1e-14 Identities = 170/246 (69%), Gaps = 8/246 (3%) Strand=Plus/Minus Query 126047 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCT 126106 ||||| || ||| | ||||||||| ||| ||| || || || ||||| || || Sbjct 72643 GCAAAGTCGGTGTGCATACCCTCGTCTCGGCTGATAAGCTCGTTAGAGAACGTCAACCCC 72584 Query 126107 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATT 126166 ||||| | ||||||||||||| ||||||||| || || || || |||||||| | Sbjct 72583 GGCATCAACCCCCGCTTCTTCAGCCAGAAAATGGCGGCGAACGACCCGGAGAAGAACACG 72524 Query 126167 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAA---GGAGCGCGACTTTGT-GTC 126222 ||||| || ||| || || | || | ||| ||||| || ||| | || || Sbjct 72523 CCCTCGACTGCCGCAAATGCGACCAGCCTCTCCGCAAACACTGAACGC----TCGTCCTC 72468 Query 126223 AAACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTC 126282 || ||| || |||||| | |||||| || ||||||||||| ||| | ||| || || Sbjct 72467 AATCCAGCGCAACGCCCAGTCCGCCTTCTTACGGATACACGGGATGGTGTCGATGGCGTC 72408 Query 126283 AAAGAG 126288 || || Sbjct 72407 GAACAG 72402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597281559155840