Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000787515.1_202014-11-26] 9,648 sequences; 31,621,284 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq5619 102 8e-17 >seq5619 Length=11060 Score = 102 bits (112), Expect = 8e-17 Identities = 164/236 (69%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 94069 TCCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTC 94128 ||||||||| || || || || ||| |||||| | || || ||||| || || ||| Sbjct 3093 TCCTACATCGCTGGCACAAACGGTTACTCAAACGGCATTGTGCCGATGCTACGCGTGTTC 3034 Query 94129 AACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTC 94188 || | | || ||||| || || |||||||| | | || |||| || ||| Sbjct 3033 GACGCCACCGCTCGCTATGTCGATCAGGGTGGCAACAAACGACCCGGAGCTTTTGCCGTC 2974 Query 94189 TATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGC 94248 || ||||||| ||||| | ||||| | ||| | ||||| || |||||||| ||| Sbjct 2973 TACGTCGAGCCATGGCATGGAGACGTCTTTGAATTCCTTGACCTTCGTAAGAACCATGGC 2914 Query 94249 AACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTT 94304 || || | | | || | ||| | |||||||||||||||||||| |||||||| Sbjct 2913 AAAGAAGAAGTGCGTGCACGTGACTTATTCTACGCTCTCTGGGTGCCCGACCTTTT 2858 Score = 93.3 bits (102), Expect = 4e-14 Identities = 81/101 (80%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 94528 GCCAAGTCCAACCAGCAGCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATT 94587 |||||||| ||||||||| ||||||| ||||||| || ||||| |||||||||||| Sbjct 2526 GCCAAGTCAAACCAGCAGAACCTCGGCACGATCAAGTCGTCCAATCTCTGCACCGAGATT 2467 Query 94588 GTCGAGTATACTTCTCCGGACGAGATTGCTGTGTGTAACCT 94628 |||||||| | ||||| || |||| ||||| || || || Sbjct 2466 GTCGAGTACTCGTCTCCCGATGAGACGGCTGTCTGCAATCT 2426 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494663536382080