Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000787515.1_202014-11-26] 9,648 sequences; 31,621,284 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq7597 147 5e-30 seq1153 147 5e-30 seq6239 102 2e-16 >seq7597 Length=53330 Score = 147 bits (162), Expect = 5e-30 Identities = 158/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 |||||||| ||||| || |||||||| |||| ||||||||| | | || | ||| || Sbjct 51542 AGGACAAGATGGAGGGTAGACTCCTTCTGGATGTTGTAGTCTGAGAGGGTGCGTCCGTCC 51483 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||||||||| ||||||||||| ||||| |||||||| ||| || || || ||| Sbjct 51482 TCCAGCTGCTTGCCGGCGAAGATAAGACGTTGCTGGTCGGGAGGGATACCCTCCTTGTCC 51423 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||| ||| || | |||||||| | || || || | ||||||||| Sbjct 51422 TGAATCTTCGCCTTGACGTTGTCAATGGTGTCTGACGACTCAACCTCAAGGGTGATCGTC 51363 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || |||||||| || || || ||||| || Sbjct 51362 TTCCCCGTGAGGGTCTTGACGAAAATCTG 51334 Score = 131 bits (144), Expect = 4e-25 Identities = 152/205 (74%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 199422 CAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCA 199481 ||||||||||||| |||||||| |||| |||||| || | ||| |||| ||||| || | Sbjct 51766 CAAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAATCGGACAAGGTCCGCCCATCCTCAA 51707 Query 199482 GCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAA 199541 ||||||| || |||||||| | |||||||| || || ||| || || ||||||| Sbjct 51706 GCTGCTTGCCAGCGAAGATCAAGCGCTGCTGATCAGGGGGAATGCCCTCCTTGTCCTGAA 51647 Query 199542 TCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTAC 199601 |||| ||| ||| |||| ||| || | | ||| || || | ||||| ||||| | Sbjct 51646 TCTTCGCCTTTACGTTGTCGATGGTATCGGAGGATTCGACCTCAAGAGTGATAGTCTTGC 51587 Query 199602 CCGTGAGAGTTTTCACAAAAATTTG 199626 | || || |||||||| || || || Sbjct 51586 CGGTAAGCGTTTTCACGAAGATCTG 51562 Score = 129 bits (142), Expect = 1e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| | ||| || ||||||||||| |||| |||||| || | ||| || | || || Sbjct 52051 AGGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGACAAGGTACGGCCGTCC 51992 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 |||||||||||||| |||||||| |||||||||||||| ||| || || || || Sbjct 51991 TCCAGCTGCTTTCCAGCGAAGATAAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCT 51932 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||||||| |||| ||| || | | || || || | |||||| ||| Sbjct 51931 TGGATCTTCGCCTTCACGTTATCGATGGTATCCGACGACTCGACCTCAAGCGTGATGGTC 51872 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || | || ||||| || ||||| Sbjct 51871 TTGCCAGTCAACGTCTTCACGAAGATTTG 51843 Score = 127 bits (140), Expect = 5e-24 Identities = 159/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | |||||| || ||||| || |||||||| |||| ||||||||| | | || Sbjct 52288 CGGAGACGCAGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGCGTA 52229 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || || |||| |||||| || ||||||||||| |||||||| |||||| || || Sbjct 52228 CGCCCGTCCTCCAACTGCTTCCCCGCGAAGATGAGGCGCTGCTGATCCGGAGGGATGCCC 52169 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| ||| ||| |||| ||||| | | || || |||||| Sbjct 52168 TCCTTGTCCTGGATCTTCGCCTTGACGTTGTCGATCGTGTCGGAAGACTCGACCTCCAAC 52109 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| ||||| || || || ||||| || || Sbjct 52108 GTAATGGTCTTTCCCGTAAGGGTCTTGACAAAGATCTG 52071 Score = 86.0 bits (94), Expect = 1e-11 Identities = 80/102 (78%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| ||||| ||||| ||||| || |||| ||||||||| | | || | || ||| Sbjct 51314 AGGACTAGGTGAAGAGTAGACTCTTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCT 51255 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGA 199519 || |||||||| || || ||||| || ||||||||||| ||| Sbjct 51254 TCGAGCTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCAGGA 51213 Score = 84.2 bits (92), Expect = 5e-11 Identities = 66/79 (84%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 200938 ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAA 200997 |||||||| || |||||| | || ||||| |||| ||| ||||||||||| ||||||| Sbjct 51688 ATCTTCGCTGGCAAGCAGCTTGAGGATGGGCGGACCTTGTCCGATTACAACATCCAGAAG 51747 Query 200998 GAGTCTACTCTTCACCTTG 201016 ||||| ||||| ||||||| Sbjct 51748 GAGTCCACTCTCCACCTTG 51766 >seq1153 Length=45894 Score = 147 bits (162), Expect = 5e-30 Identities = 158/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 |||||||||||||| ||||||||||| || | ||||||||||| | || | || || Sbjct 2014 AGGACAAGGTGGAGCGTCGACTCCTTCTGAATGTTGTAGTCAGAGAGCGTGCGGCCGTCC 2073 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || || ||||| || || ||||| || ||||||||||||||| || || || ||| Sbjct 2074 TCGAGTTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGGATACCCTCCTTATCC 2133 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || |||||| ||| ||| |||| || || | | ||| || ||||| ||||||||| Sbjct 2134 TGGATCTTTGCCTTGACGTTGTCGATTGTATCCGACGATTCAACCTCCAAGGTGATCGTC 2193 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||||||||| || || || || ||||| Sbjct 2194 TTACCCGTGAGGGTCTTGACGAAGATTTG 2222 Score = 129 bits (142), Expect = 1e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| ||||| || ||||||||||| |||| ||||||||| | | || | ||||| Sbjct 1786 AGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGCGTGCGGCCATCC 1845 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| |||||||||||||| ||||||||||| || || || || ||| Sbjct 1846 TCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGCGGGATACCCTCCTTGTCC 1905 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| |||||| |||| |||||| | | || || || | ||||| ||| Sbjct 1906 TGGATCTTCGCCTTCACATTGTCGATGGTGTCCGACGACTCGACCTCGAGAGTGATGGTC 1965 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || ||||| || || || ||||| Sbjct 1966 TTGCCGGTCAGAGTCTTAACGAAGATTTG 1994 Score = 118 bits (130), Expect = 2e-21 Identities = 149/205 (73%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 199422 CAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCA 199481 ||||||| || || |||||| |||| ||||||||| | ||| || | ||||| || | Sbjct 2306 CAAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGACAAGGTGCGACCATCCTCAA 2365 Query 199482 GCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAA 199541 ||||||| || |||||||| |||||||||||||| || || || || ||||||| Sbjct 2366 GCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGAA 2425 Query 199542 TCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTAC 199601 |||| ||||||| |||| ||||| | | || || || | ||||| ||||| | Sbjct 2426 TCTTCGCCTTCACGTTGTCGATCGTGTCGGAAGACTCGACCTCGAGAGTGATGGTCTTCC 2485 Query 199602 CCGTGAGAGTTTTCACAAAAATTTG 199626 |||| | || || ||||| || || Sbjct 2486 CCGTCAACGTCTTGACAAAGATCTG 2510 Score = 100 bits (110), Expect = 7e-16 Identities = 144/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 199424 AGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGC 199483 ||||||||||| |||||| || | ||| || || | | || | ||||| ||||| Sbjct 2587 AGGTGGAGAGTGCTCTCCTTCTGAATGTTATAATCGGAGAGGGTACGACCATCCTCCAGT 2646 Query 199484 TGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATC 199543 ||||| || || |||||||||||||||||||| ||| || || || ||||| ||| Sbjct 2647 TGCTTGCCAGCAAAGATGAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTGGATC 2706 Query 199544 TTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCC 199603 || |||||| |||| |||||| | | || || || | ||||| ||||| || Sbjct 2707 TTAGCCTTCACATTGTCGATGGTGTCCGACGACTCGACCTCGAGGGTGATGGTCTTGCCG 2766 Query 199604 GTGAGAGTTTTCACAAAAATTTG 199626 || | ||| || ||||| || || Sbjct 2767 GTCAAAGTCTTGACAAAGATCTG 2789 Score = 93.3 bits (102), Expect = 1e-13 Identities = 87/111 (78%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | ||||| || || || || ||||| || || | ||||||||||| | ||| Sbjct 2800 CGAAGACGGAGGACGAGATGAAGCGTGGACTCTTTCTGAATGTTGTAGTCAGAAAGAGTG 2859 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGA 199519 | || || || |||||||| ||||||||||| |||||||||||||| ||| Sbjct 2860 CGGCCGTCCTCAAGCTGCTTCCCGGCGAAGATAAGACGCTGCTGGTCGGGA 2910 >seq6239 Length=75403 Score = 102 bits (112), Expect = 2e-16 Identities = 83/101 (82%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 |||||||||||||| ||||||||||| |||| ||||||||| | || | ||||| Sbjct 57488 AGGACAAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGGCCATCC 57547 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518 || |||||||| ||||| ||||| |||||||||||||| || Sbjct 57548 TCAAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCGGG 57588 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178775867606416