Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000787515.1_202014-11-26] 9,648 sequences; 31,621,284 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq38 342 5e-89 seq7597 120 3e-22 seq1153 120 3e-22 seq2399 104 2e-17 seq6239 87.8 2e-12 >seq38 Length=96116 Score = 342 bits (378), Expect = 5e-89 Identities = 456/631 (72%), Gaps = 7/631 (1%) Strand=Plus/Plus Query 132814 TGCTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGC 132873 |||||||| |||||||| || |||| ||||| | | | | ||| | || || | Sbjct 69967 TGCTCGATAGCGACCGCCTCAGTGATGATTTGACGGATGATCTCCGGGTGGGGGCGCCTC 70026 Query 132874 ACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATG 132933 | ||| |||| | |||||| || |||||| |||| ||||||||| | || || Sbjct 70027 TTGAGATGACTGAAAAGCAAGCACGCGAAGTCGGTGTGCATGCCCTCGTCACGCGAGATA 70086 Query 132934 AGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCG 132993 || || ||| ||| || | |||||||| |||||||| || |||||||| || |||| | Sbjct 70087 AGCTCATTGGAGAACGTGAGACCGGGCATCAGGCCGCGCTTCTTGAGCCAGAAGATGGAG 70146 Query 132994 GCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCG 133053 || || || || ||||||| ||||| || |||||||||||||| || ||||| || Sbjct 70147 GCAAAGGAACCAGAGAAGAAGATACCCTCCACAGCCGCGAAAGCCACGAGCCGCTCCGCG 70206 Query 133054 AACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCAC 133113 || | || || ||| | ||||||| ||| ||||| || ||||| | |||| ||| Sbjct 70207 AAGGCGGACTCCTTGTCAGAGATCCAGTGCAAAGCCCAGTCCGCCTTCTTCTTGATGCAA 70266 Query 133114 GGCATCGTTTCGATGGCGTTCAACAAACGGAGTTTCTCTTCCGAGGAACGC--ACGTAGG 133171 || ||||| |||||||||| || || | | | || | ||| | | ||| | Sbjct 70267 GGAATCGTCTCGATGGCGTCGAA--AAGGTGCTCGCGCTGCTTGGGATCCTTGATGTACG 70324 Query 133172 TGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGT 133231 |||||||||| ||| || | |||||||| | ||||||||| ||| || ||||||| Sbjct 70325 TGTCGATGAGCAGCGAGTATGTCTCCGAGTGGATGTTCTCCATCATGATCTGGAAGCCGT 70384 Query 133232 AAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGT 133291 | ||||| || |||||| | |||| || || | | ||| |||||||| || || |||| Sbjct 70385 AGAAGCAGCGTGCCTCGGCGGCCTGGACCTCATTGGAGAACCGCTCGACAAGGTTCTCGT 70444 Query 133292 TGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGT 133351 | ||||||||||| ||| ||||| ||||| ||||||||| ||||||||| ||||| | Sbjct 70445 TCACGATGCCGTCCGAGGCAGCGAAGAAGGCGAGCACGTGCGAGATGAAATGACGCTCAT 70504 Query 133352 TGTCGTTCAAGCG---CTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGG 133408 |||||| | ||| | ||| ||| | ||||||||| ||||||| ||||||| | | Sbjct 70505 CGTCGTTGAGGCGGTTGTTCCAATCGTGGAGGTCCTTGGAAAGGTCCATCTCCTCGGCAG 70564 Query 133409 TCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 |||| || || ||||| || || |||||||| Sbjct 70565 TCCAGAATGAAGCCTCAGCCTTCTTGTACAT 70595 Score = 266 bits (294), Expect = 3e-66 Identities = 395/553 (71%), Gaps = 13/553 (2%) Strand=Plus/Minus Query 132895 CAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAG 132954 || ||||||||| |||| |||||||| | | || || ||||| ||| ||||| Sbjct 72646 CACGCAAAGTCGGTGTGCATACCCTCGTCTCGGCTGATAAGCTCGTTAGAGAACGTCAAC 72587 Query 132955 CCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAG 133014 || ||||| | || || || || ||||| || ||||||||||| || || ||||| Sbjct 72586 CCCGGCATCAACCCCCGCTTCTTCAGCCAGAAAATGGCGGCGAACGACCCGGAGAAGAAC 72527 Query 133015 ACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACG-TGGCTTCTT-TGCTGG 133072 ||||||||||| ||||| || || ||||| | ||| | ||| || || | || Sbjct 72526 ACGCCCTCGACTGCCGCAAATGCGACCAGCCTCTCCGCAAACACTGAACGCTCGTCCT-- 72469 Query 133073 CGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGT 133132 | |||||||||| |||||| || ||||| | || ||||| || || |||||||||| Sbjct 72468 CAATCCAGCGCAACGCCCAGTCCGCCTTCTTACGGATACACGGGATGGTGTCGATGGCGT 72409 Query 133133 TCAACA--AACGGAGTTTCTCTTCCGAGGAACGC-ACGTAGGTGTCGATGAGGGTCGAAT 133189 |||| |||| ||| || || | | || ||||||||||| ||| | Sbjct 72408 CGAACAGGAACGCGCGTTCAG---CGGGGTCCTTGATATACGTGTCGATGAGCAGCGAGT 72352 Query 133190 ACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGA 133249 || | |||||||| || ||||| || ||| || ||||| |||||||| ||||||||| Sbjct 72351 ACGTCTCCGAGTGCACATTCTCGATCATGATCTGGAAGCCATAAAAGCAGCGCGCCTCGG 72292 Query 133250 CCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGG 133309 | |||| || || | || ||| |||||||| ||||| ||||| ||||||||||| || Sbjct 72291 CGGCCTGTACCTCGTTAGAGAACCGCTCGACGAGATTCTCGTTCACGATGCCGTCCGAGG 72232 Query 133310 CGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTT---CAAGCGCT 133366 ||||||| || || ||||||| |||||| ||||||||||| |||| | | | Sbjct 72231 CGGCGAAGAAAGCAAGCACGTAGGAGATGAAGTGGCGCTCGTTTGCGTTGAGCTTGTAGT 72172 Query 133367 CCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGG 133426 |||||| ||| |||| |||| | ||||||||||||||| |||||||| | || Sbjct 72171 TCCAGTCCATGAGGTCGTTGGCGAGGTTGATCTCCTCGACGGTCCAGAACGACGCTTGGG 72112 Query 133427 CTTTTTTGTACAT 133439 | || |||||||| Sbjct 72111 CGTTCTTGTACAT 72099 >seq7597 Length=53330 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || |||||||| || || |||||| | || || ||| | | Sbjct 51331 ATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTTGAGTCGTCA 51390 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | || || | ||||| ||||| || || ||||||| Sbjct 51391 GACACCATTGACAACG-TCAAGGCGAAGATTCAGGACAAGGAGGGTATCCCTCCCGACCA 51449 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 || || || || | ||| ||||| |||||||| |||| ||||||||| |||||||| Sbjct 51450 GCAACGTCTTATCTTCGCCGGCAAGCAGCTGGAGGACGGACGCACCCTCTCAGACTACAA 51509 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||| ||||| | || || ||| | || || ||| | | ||||| Sbjct 51510 CATCCAGAAGGAGTCTACCCTCCATCTTGTCCTCCGTCTCCGTGGCGG 51557 Score = 118 bits (130), Expect = 1e-21 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || ||| | || ||||| |||||||| | || |||||| | | Sbjct 51840 ATGCAAATCTTCGTGAAGACGTTGACTGGCAAGACCATCACGCTTGAGGTCGAGTCGTCG 51899 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | | | |||| | || | || |||| ||||| ||||| || || ||||||| Sbjct 51900 GATACCATCGATAACG-TGAAGGCGAAGATCCAAGACAAGGAGGGCATCCCTCCCGACCA 51958 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | ||| || || |||||||| |||| || ||| | || ||||| Sbjct 51959 GCAGCGTCTTATCTTCGCTGGAAAGCAGCTGGAGGACGGCCGTACCTTGTCGGATTACAA 52018 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 |||||| ||||| |||| || || ||||| || || ||| | || ||| Sbjct 52019 CATCCAGAAGGAGTCGACCCTTCACTTGGTCCTCCGCTTGCGTGGTGGC 52067 Score = 118 bits (130), Expect = 1e-21 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || ||||| || ||||| || | || |||||| | || Sbjct 52068 ATGCAGATCTTTGTCAAGACCCTTACGGGAAAGACCATTACGTTGGAGGTCGAGTCTTCC 52127 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | || |||| ||||| ||||| || || | || || Sbjct 52128 GACACGATCGACAACG-TCAAGGCGAAGATCCAGGACAAGGAGGGCATCCCTCCGGATCA 52186 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| ||||| | |||||| || ||| |||| |||| ||| || ||| ||||||||| Sbjct 52187 GCAGCGCCTCATCTTCGCGGGGAAGCAGTTGGAGGACGGGCGTACGCTCTCCGACTACAA 52246 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 |||||| ||||| | || || ||| | || |||||| | | |||||| Sbjct 52247 CATCCAGAAGGAGTCCACCCTCCATCTCGTCCTGCGTCTCCGTGGCGGC 52295 Score = 104 bits (114), Expect = 2e-17 Identities = 153/213 (72%), Gaps = 3/213 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| |||||||| || ||||| || ||||| | || ||||| || || Sbjct 51559 ATGCAGATCTTCGTGAAAACGCTTACCGGCAAGACTATCACTCTTGAGGTCGAATCCTCC 51618 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | | | |||| | || | || || | ||||| ||||| |||||| | || || Sbjct 51619 GATACCATCGACAACG-TAAAGGCGAAGATTCAGGACAAGGAGGGCATTCCCCCTGATCA 51677 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| | || | ||| ||||| ||||| || || | ||| ||| | ||| ||||| Sbjct 51678 GCAGCGCTTGATCTTCGCTGGCAAGCAGCTTGAGGATGGGCGGACCTTGTCCGATTACAA 51737 Query 38423 CATCCAAAAGGAAGCGACGCTGCA-TTTGGTGC 38454 |||||| ||||| | || || || ||||||| Sbjct 51738 CATCCAGAAGGAGTCCACTCTCCACCTTGGTGC 51770 >seq1153 Length=45894 Score = 120 bits (132), Expect = 3e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || || || ||||| |||||||| |||| |||||| | | Sbjct 1997 ATGCAAATCTTCGTTAAGACTCTGACCGGCAAGACCATCACTCTCGAGGTCGAGTCGTCG 1938 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || | || |||| ||||| ||||| || || ||||||| Sbjct 1937 GACACCATCGACAATGTGAAGGCGAAGATCCAGGACAAGGAGGGTATCCCGCCCGACCAG 1878 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| ||||| | ||| ||||| ||||| || || | ||||| || ||||||||| Sbjct 1877 CAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACGCTTTCGGACTACAAC 1818 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||| ||||| |||| || || | || || ||| Sbjct 1817 ATCCAGAAGGAGTCGACCCTTCACCTCGTCCTTCGT 1782 Score = 105 bits (116), Expect = 7e-18 Identities = 140/192 (73%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || ||| | ||||| || |||||||| |||| |||||| | || Sbjct 2513 ATGCAGATCTTTGTCAAGACGTTGACGGGGAAGACCATCACTCTCGAGGTCGAGTCTTCC 2454 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | || || | ||||| ||||| || || ||||||| Sbjct 2453 GACACGATCGACAACG-TGAAGGCGAAGATTCAGGACAAGGAGGGCATCCCGCCCGACCA 2395 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | ||| ||||| ||||| || || | |||||| | ||||||||| Sbjct 2394 GCAGCGTCTGATCTTCGCTGGCAAGCAGCTTGAGGATGGTCGCACCTTGTCCGACTACAA 2335 Query 38423 CATCCAAAAGGA 38434 |||||| ||||| Sbjct 2334 CATCCAGAAGGA 2323 Score = 95.1 bits (104), Expect = 1e-14 Identities = 145/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || |||||||| || || |||||| | || || || | | Sbjct 2225 ATGCAAATCTTCGTCAAGACCCTCACGGGTAAGACGATCACCTTGGAGGTTGAATCGTCG 2166 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | | |||| | || | ||| |||| || || ||||| || || | ||||| Sbjct 2165 GATACAATCGACAACG-TCAAGGCAAAGATCCAGGATAAGGAGGGTATCCCTCCGGACCA 2107 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | || ||||| || || || |||| ||||| ||| |||||||| Sbjct 2106 GCAGCGCCTGATCTTTGCTGGCAAGCAACTCGAGGACGGCCGCACGCTCTCTGACTACAA 2047 Query 38423 CATCCAAAAGGAAGCGACGCTGCA 38446 ||| || ||||| ||||||| || Sbjct 2046 CATTCAGAAGGAGTCGACGCTCCA 2023 >seq2399 Length=624 Score = 104 bits (114), Expect = 2e-17 Identities = 96/122 (79%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 38349 ATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACC 38408 |||||| ||||||| ||||| || || | ||||||||| ||||| || |||| |||||| Sbjct 321 ATTCCCCCCGACCAGCAGCGCCTGATCTTCGCGGGCAAGCAGCTCGAGGACGGCCGCACC 380 Query 38409 CTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGC 38468 |||| ||||||||||||||| ||||| | || || || | ||||| ||| || | || Sbjct 381 CTCAGCGACTACAACATCCAGAAGGAGTCCACCCTCCACCTCGTGCTTCGTCTGCGTGGT 440 Query 38469 GG 38470 || Sbjct 441 GG 442 >seq6239 Length=75403 Score = 87.8 bits (96), Expect = 2e-12 Identities = 78/98 (80%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 38349 ATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACC 38408 |||||| ||||||| ||||| || || | || ||||| ||||| || || | |||||| Sbjct 57594 ATTCCCCCCGACCAGCAGCGTCTGATCTTTGCCGGCAAGCAGCTTGAGGATGGCCGCACC 57535 Query 38409 CTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCA 38446 |||| ||||||||||||||| ||||| |||| || || Sbjct 57534 CTCAGCGACTACAACATCCAGAAGGAGTCGACCCTCCA 57497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500112479160320