Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000787515.1_202014-11-26] 9,648 sequences; 31,621,284 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq2907 82.4 9e-11 seq1570 82.4 9e-11 seq1568 82.4 9e-11 >seq2907 Length=23199 Score = 82.4 bits (90), Expect = 9e-11 Identities = 57/64 (89%), Gaps = 2/64 (3%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCC--CG 136774 ||||||||||||||||||||||||||| |||||||||||||| ||||||| ||| || Sbjct 19935 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGTCGGTTCGATCCCGGCG 19876 Query 136775 TTGG 136778 |||| Sbjct 19875 TTGG 19872 Score = 82.4 bits (90), Expect = 9e-11 Identities = 57/64 (89%), Gaps = 2/64 (3%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCC--CG 136774 ||||||||||||||||||||||||||| |||||||||||||| ||||||| ||| || Sbjct 23018 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGTCGGTTCGATCCCGGCG 23077 Query 136775 TTGG 136778 |||| Sbjct 23078 TTGG 23081 >seq1570 Length=18624 Score = 82.4 bits (90), Expect = 9e-11 Identities = 57/64 (89%), Gaps = 2/64 (3%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCC--CG 136774 ||||||||||||||||||||||||||| |||||||||||||| ||||||| ||| || Sbjct 12720 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGTCGGTTCGATCCCGGCG 12779 Query 136775 TTGG 136778 |||| Sbjct 12780 TTGG 12783 Score = 82.4 bits (90), Expect = 9e-11 Identities = 57/64 (89%), Gaps = 2/64 (3%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCC--CG 136774 ||||||||||||||||||||||||||| |||||||||||||| ||||||| ||| || Sbjct 17263 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGTCGGTTCGATCCCGGCG 17204 Query 136775 TTGG 136778 |||| Sbjct 17203 TTGG 17200 >seq1568 Length=32125 Score = 82.4 bits (90), Expect = 9e-11 Identities = 57/64 (89%), Gaps = 2/64 (3%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCC--CG 136774 ||||||||||||||||||||||||||| |||||||||||||| ||||||| ||| || Sbjct 6839 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGTCGGTTCGATCCCGGCG 6780 Query 136775 TTGG 136778 |||| Sbjct 6779 TTGG 6776 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588904969494400