Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000787515.1_202014-11-26] 9,648 sequences; 31,621,284 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq7597 111 1e-19 seq1153 109 4e-19 >seq7597 Length=53330 Score = 111 bits (122), Expect = 1e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| || ||| | ||| | || |||||||| || ||||| || Sbjct 51521 TCCTTCTGGATGTTGTAGTCTGAGAGGGTGCGTCCGTCCTCCAGCTGCTTGCCGGCGAAG 51462 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || ||||||||||| | || | ||||||||||| ||||||| |||||| Sbjct 51461 ATAAGACGTTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGAATCTTCGCCTTGACGTTG 51402 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || | |||||| || | ||| || || || |||||||| ||||| || Sbjct 51401 TCAATGGTGTCTGACGACTCAACCTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACG 51342 Query 34971 AAGATCTGCAT 34981 || |||||||| Sbjct 51341 AAAATCTGCAT 51331 Score = 87.8 bits (96), Expect = 1e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| || || | || | || |||| ||| || || || || Sbjct 52258 TCCTTCTGGATGTTGTAGTCGGAGAGCGTACGCCCGTCCTCCAACTGCTTCCCCGCGAAG 52199 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || ||||| || | || | ||||||||||| |||||| |||||| Sbjct 52198 ATGAGGCGCTGCTGATCCGGAGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTG 52139 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| || | ||| || || | || ||||| |||||||| || ||||| ||| Sbjct 52138 TCGATCGTGTCGGAAGACTCGACCTCCAACGTAATGGTCTTTCCCGTAAGGGTCTTGACA 52079 Query 34971 AAGATCTGCAT 34981 ||||||||||| Sbjct 52078 AAGATCTGCAT 52068 Score = 86.0 bits (94), Expect = 4e-12 Identities = 148/213 (69%), Gaps = 8/213 (4%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||||| || || ||||| ||||| || ||||| | | | || | || ||| Sbjct 52048 ACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGACAAGGTACGGCCGTCCTCC 51989 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| ||||| || || || || || |||||||| | || | ||||||||||| Sbjct 51988 AGCTGCTTTCCAGCGAAGATAAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCTTGG 51929 Query 34893 ATCTTCTGTTTGACGGATGCTATCGAT--TCACCG--GCCTCAACATCGACGGTTATGGT 34948 |||||| || || | ||||||| | ||| | ||| || || | || ||||| Sbjct 51928 ATCTTCGCCTTCAC----GTTATCGATGGTATCCGACGACTCGACCTCAAGCGTGATGGT 51873 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || || | |||||||| ||||| ||||| Sbjct 51872 CTTGCCAGTCAACGTCTTCACGAAGATTTGCAT 51840 >seq1153 Length=45894 Score = 109 bits (120), Expect = 4e-19 Identities = 151/210 (72%), Gaps = 1/210 (0%) Strand=Plus/Plus Query 34773 ACCAAG-TGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 |||||| |||| ||||| || ||||| ||||| ||||| || | | | || |||| || Sbjct 2304 ACCAAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGACAAGGTGCGACCATCCTC 2363 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 ||||| || || || || || || || |||||||| |||| | ||||||||||| Sbjct 2364 AAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTG 2423 Query 34892 AATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTT 34951 ||||||| || ||| | |||| || | ||| || |||| || ||||| || Sbjct 2424 AATCTTCGCCTTCACGTTGTCGATCGTGTCGGAAGACTCGACCTCGAGAGTGATGGTCTT 2483 Query 34952 TCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 ||||| | ||||| |||||||||||||| Sbjct 2484 CCCCGTCAACGTCTTGACAAAGATCTGCAT 2513 Score = 105 bits (116), Expect = 4e-18 Identities = 147/202 (73%), Gaps = 8/202 (4%) Strand=Plus/Plus Query 34785 GTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCG 34844 ||||| || |||||||||||||| || || ||| | || |||| ||||| || || || Sbjct 2596 GTGCTCTCCTTCTGAATGTTATAATCGGAGAGGGTACGACCATCCTCCAGTTGCTTGCCA 2655 Query 34845 GCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTG 34904 ||||| || || || |||||||| | || | ||||||||||| ||||| || Sbjct 2656 GCAAAGATGAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTGGATCTTAGCCTTC 2715 Query 34905 ACGGATGCTATCGAT--TCACCG--GCCTCAACATCGACGGTTATGGTTTTTCCCGTGAG 34960 || || | ||||| | ||| | ||| || |||| ||| ||||| || || || | Sbjct 2716 AC--AT--TGTCGATGGTGTCCGACGACTCGACCTCGAGGGTGATGGTCTTGCCGGTCAA 2771 Query 34961 AGTCTTCACAAAGATCTGCATA 34982 |||||| ||||||||||||||| Sbjct 2772 AGTCTTGACAAAGATCTGCATA 2793 Score = 100 bits (110), Expect = 2e-16 Identities = 142/196 (72%), Gaps = 8/196 (4%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||||||||| | || |||| || ||||| || ||||| || Sbjct 1807 TCCTTCTGGATGTTGTAGTCCGAAAGCGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAG 1866 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| |||| | ||||||||||| |||||| || || || Sbjct 1867 ATGAGGCGCTGCTGGTCGGGCGGGATACCCTCCTTGTCCTGGATCTTCGCCTTCAC--AT 1924 Query 34911 GCTATCGAT--TCACCG--GCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 | ||||| | ||| | ||| || |||| || ||||| || || || |||||||| Sbjct 1925 --TGTCGATGGTGTCCGACGACTCGACCTCGAGAGTGATGGTCTTGCCGGTCAGAGTCTT 1982 Query 34967 CACAAAGATCTGCATA 34982 || ||||| |||||| Sbjct 1983 AACGAAGATTTGCATA 1998 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324595427958144