Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000787515.1_202014-11-26] 9,648 sequences; 31,621,284 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq38 250 5e-61 seq5619 129 1e-24 >seq38 Length=96116 Score = 250 bits (276), Expect = 5e-61 Identities = 394/559 (70%), Gaps = 13/559 (2%) Strand=Plus/Plus Query 48125 AGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAG 48184 |||| ||| || ||||| |||||| ||| ||||| || ||| ||| | |||||||| Sbjct 70042 AGCAAGCACGCGAAGTCGGTGTGCATGCCCTCGTCACGCGAGATAAGCTCATTGGAGAAC 70101 Query 48185 CAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAG 48244 |||||| ||||| | || | || ||||||||||| || | || || || |||||| Sbjct 70102 GTGAGACCGGGCATCAGGCCGCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGAACCAGAG 70161 Query 48245 AAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTG 48304 |||||||| |||||||| |||||||| || ||||| ||| |||| | | | |||| Sbjct 70162 AAGAAGATACCCTCCACAGCCGCGAAAGCCACGAGCCGCTCCGCGAAGGCGGACTCCTTG 70221 Query 48305 TCTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATG 48364 || ||||||||| | |||||||| ||||||||||||||||| || |||||||| ||| Sbjct 70222 TCAGAGATCCAGTGCAAAGCCCAGTCCGCCTTCTTCTTGATGCAAGGAATCGTCTCGATG 70281 Query 48365 GCCCGGAAGAGCTTCTTGCACTCACCTGCG-TCCGCAACATAGGT---AGTGAGCAGCTT 48420 || ||| || | || || || | || | ||| | || || |||||||| Sbjct 70282 GCGTCGAAAAGGTGCTCGCGCT-GCTTGGGATCCTTGATGTACGTGTCGATGAGCAGC-- 70338 Query 48421 TGCGTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGC 48480 | ||| |||| ||||| | ||||| || ||||||||| ||||||||| | || Sbjct 70339 -GAGTATGTCTCCGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGTGC 70397 Query 48481 CTCAAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATC 48540 ||| |||| || || ||||||| | ||| | || ||||| || || || || || Sbjct 70398 CTCGGCGGCCTGGACCTCATTGGAGAACCGCTCGACAAGGTTCTCGTTCACGATGCCGTC 70457 Query 48541 TGAAGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGC 48600 || ||||| |||||||| || || || | |||||| ||||| | || | |||| || Sbjct 70458 CGAGGCAGCGAAGAAGGCGAGCACGTGCGAGATGAAATGACGCTCATCGTCGTTGAG-GC 70516 Query 48601 ----ATTCCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACG 48656 ||||| | || | ||| ||| ||||||| || || |||||||||| || | Sbjct 70517 GGTTGTTCCAATCGTGGAGGTCCTTGGAAAGGTCCATCTCCTCGGCAGTCCAGAATGAAG 70576 Query 48657 CGAGTGCTTTTTTGTACAT 48675 | || || |||||||| Sbjct 70577 CCTCAGCCTTCTTGTACAT 70595 Score = 214 bits (236), Expect = 3e-50 Identities = 394/571 (69%), Gaps = 15/571 (3%) Strand=Plus/Minus Query 48123 AGAGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGA 48182 |||| | || |||||||| |||||| || ||||| |||||||| ||| |||| |||| Sbjct 72654 AGAGGAGACACGCAAAGTCGGTGTGCATACCCTCGTCTCGGCTGATAAGCTCGTTAGAGA 72595 Query 48183 AGCAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAG 48242 | | || ||||| | ||||| || || ||||||||||| || ||||| || || | Sbjct 72594 ACGTCAACCCCGGCATCAACCCCCGCTTCTTCAGCCAGAAAATGGCGGCGAACGACCCGG 72535 Query 48243 AGAAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGA---AGCGT 48299 ||||||| | |||||| |||||||| || ||| |||||||| | ||| | | || Sbjct 72534 AGAAGAACACGCCCTCGACTGCCGCAAATGCGACCAGCCTCTC-CGCAAACACTGAACG- 72477 Query 48300 TCTTGTCTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCT 48359 || ||| |||||| | ||||||||| |||||||| ||| || || || || | Sbjct 72476 -CTCGTCCTCAATCCAGCGCAACGCCCAGTCCGCCTTCTTACGGATACACGGGATGGTGT 72418 Query 48360 CTATGGCCCGGAAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGAGCA 48416 | ||||| ||| || | || ||| | | |||| | ||| || |||||| Sbjct 72417 CGATGGCGTCGAACAGGAACGCGCGTTCAGCGGGGTCCTTGATATACGTGTCGATGAGCA 72358 Query 48417 GCTTTGCGTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCC 48476 || | |||| |||| |||||||||||||| || ||||||||| || || ||| | Sbjct 72357 GC---GAGTACGTCTCCGAGTGCACATTCTCGATCATGATCTGGAAGCCATAAAAGCAGC 72301 Query 48477 TGGCCTCAAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCC 48536 ||||| |||| || || | ||||| | ||| | |||||||| || || || | Sbjct 72300 GCGCCTCGGCGGCCTGTACCTCGTTAGAGAACCGCTCGACGAGATTCTCGTTCACGATGC 72241 Query 48537 CATCTGAAGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGA 48596 | || || || || ||||| ||||| || | | ||| ||||||||||| | ||| Sbjct 72240 CGTCCGAGGCGGCGAAGAAAGCAAGCACGTAGGAGATGAAGTGGCGCTCGTTTGCGTTGA 72181 Query 48597 G--AGCA-TTCCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGG 48653 | | | |||||| || | ||| ||| | |||| | || || || |||||||| | Sbjct 72180 GCTTGTAGTTCCAGTCCATGAGGTCGTTGGCGAGGTTGATCTCCTCGACGGTCCAGAACG 72121 Query 48654 ACGCGAGTGCTTTTTTGTACATGCCCCATAT 48684 |||| | || || |||||||| |||||| Sbjct 72120 ACGCTTGGGCGTTCTTGTACATCTGCCATAT 72090 >seq5619 Length=11060 Score = 129 bits (142), Expect = 1e-24 Identities = 419/642 (65%), Gaps = 23/642 (4%) Strand=Plus/Plus Query 212961 GTGTAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATG 213020 ||||||||||||| || |||||||| || || ||||| || ||| || ||||| Sbjct 1904 GTGTAGGGCTCGAAGCATTCGTTGTTGCCGAGGATCTGACTCGTCGAGGCGGTAGGCATC 1963 Query 213021 GGAGCCACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGA--TGAGGCGCCGAAGCTCTG 213078 ||||| || || || ||||| | |||| || ||| | | | | |||||| | Sbjct 1964 GGAGCGACAAGCAGGGAGTTCCGAAGACCGTACTGTGCGACCTTTGCCTTC-AAGCTC-G 2021 Query 213079 CCCAGTCCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGA 213138 ||||||||||| ||| ||| || | | | || | |||| | || | Sbjct 2022 CCCAGTCCCAT-----AGATCGGTGGGAGTGATCCCC----CATAGGTCATATTGGAGCT 2072 Query 213139 TGCCTTTGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCT 213198 |||| | | | | |||||||||||||| | ||| |||||| |||||| |||| || Sbjct 2073 TGCCCTCGGACGCTGGGCTGCCCTGGTACGTCTCGTAAGGGCCAAACTCCTTCGCCATCT 2132 Query 213199 CGCAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCT 213258 | ||| ||| | | || || | |||||||||||| || |||| | ||||||| | Sbjct 2133 CACAGCTCGCTTCAACAGCGGCATGGTAGATGGTTTCGAAGATCTGCAGGTTGAGCCTGC 2192 Query 213259 TGGCCTCTGGGGACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGA 213318 ||||| || || || ||||| || | |||| | || ||||| ||||| | Sbjct 2193 GTGCCTCGGGCGAGTCAAACGGCATGCGCAGGGCCATGAACGCGTCGGCCAGACCCTGCA 2252 Query 213319 CCCCGATGCCGATGGGTCTGTGTCTCAGGTTAG-ACTTGGAGCACTCCTCCAAGGGGTAA 213377 | ||||| |||||||| | ||| | || ||| | || | || |||| | || || Sbjct 2253 CGCCGATTCCGATGGGGCGGTGGCGCATGTTGGAACGACGCGC-CTCCGGAATAGGATAG 2311 Query 213378 AAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGG 213437 |||| ||||||||| ||| |||||| | | |||| ||||| || | | || Sbjct 2312 TGGTTGACGTCGATGATGCGGTTCAGGTTGAACGCGACCACCTTGGTCACGTCGTGCAAC 2371 Query 213438 TACTCGTGATTGAACACGTAGCCCCCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCC 213497 | || | |||| || | || | || | || || || ||||| || Sbjct 2372 TTCTGGAAATTGTACTTG------CCATTCTCGATGAAGGACGGGAGCGCGATAGACGCG 2425 Query 213498 AGGTTGCAAACGGCCACCTCCT-GAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTT 213556 || ||||| || ||| ||| | | ||| | | |||||| | ||||||||||| || || Sbjct 2426 AGATTGCAGACAGCCGTCTCATCGGGAGAC-GAGTACTCGACAATCTCGGTGCAGAGATT 2484 Query 213557 GCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGC 213598 | | ||| ||||| |||||||| ||||||||||| || Sbjct 2485 GGACGACTTGATCGTGCCGAGGTTCTGCTGGTTTGACTTGGC 2526 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931420457144320