Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000787515.1_202014-11-26] 9,648 sequences; 31,621,284 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq1153 86.0 1e-11 >seq1153 Length=45894 Score = 86.0 bits (94), Expect = 1e-11 Identities = 128/182 (70%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 192355 ATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTC 192414 || |||||||| || | || || |||| |||| ||| || ||||||||||| | | | Sbjct 2611 ATGTTATAATCGGAGAGGGTACGACCATCCTCCAGTTGCTTGCCAGCAAAGATGAGACGC 2670 Query 192415 TGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAA 192474 || || ||||| || || || || || || || || ||| || ||||| || | Sbjct 2671 TGCTGGTCAGGAGGGATACCCTCCTTGTCCTGGATCTTAGCCTTCACATTGTCGATGGTG 2730 Query 192475 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGC 192534 || ||||| || || || || || ||||| || || || || || || | ||| |||||| Sbjct 2731 TCCGACGACTCGACCTCGAGGGTGATGGTCTTGCCGGTCAAAGTCTTGACAAAGATCTGC 2790 Query 192535 AT 192536 || Sbjct 2791 AT 2792 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984358303504800