Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000787515.1_202014-11-26] 9,648 sequences; 31,621,284 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq8570 96.9 1e-14 >seq8570 Length=955 Score = 96.9 bits (106), Expect = 1e-14 Identities = 74/88 (84%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 251486 CACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGAG 251545 |||| || ||||||||||||||||||||||| || ||||| || |||||||| || ||| Sbjct 144 CACCATGGGAAATCATACAATCACGCTCCATCTCTCCGAACCGCAGACCACCGTCACGAC 203 Query 251546 CCCTACCCTCGGCAGGCTGACGAGTGAG 251573 | ||||||| | |||||||||||||| Sbjct 204 TACGACCCTCGACGGGCTGACGAGTGAG 231 Score = 91.5 bits (100), Expect = 4e-13 Identities = 113/152 (74%), Gaps = 6/152 (4%) Strand=Plus/Plus Query 251839 TGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGT 251898 ||| |||| ||||||||| |||||| || ||||| ||||||||||||||||| | | Sbjct 497 TGGCCGATTGTCATACGAGAGGGAATGGCGTGGGGGTTGATGATGATGTCGGGCGTGATG 556 Query 251899 CCATCAGCAGTGAAGGGCATATCCTTTTCCT--CAATA-ATGTTTCCAATAGTTCCCTTT 251955 || || || ||||| ||||| ||| |||| | || || | || || || ||||| Sbjct 557 CCCTCCGCCGTGAACGGCATGTCC---TCCTGGCGGTAGGTGATACCGATGGTACCCTTC 613 Query 251956 TGTCCGTGACGAGAACTGAACTTATCACCAAT 251987 || |||||||| ||| |||||| || || || Sbjct 614 TGACCGTGACGCGAAGCGAACTTGTCGCCGAT 645 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471635661267376