Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000787515.1_202014-11-26] 9,648 sequences; 31,621,284 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq38 176 5e-38 seq2779 125 9e-23 seq5619 98.7 1e-14 >seq38 Length=96116 Score = 176 bits (194), Expect = 5e-38 Identities = 159/200 (80%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||| | ||||||||| ||||| |||||| |||||||||||||||| ||||||||| Sbjct 72997 GCCATTGCGTACTCGGAGACGCGTTTCTCGAAGAAGTTGGTCTTGCCCTGGAGCGAGATG 72938 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 | ||||| | ||||||||| | | ||||||||| ||| ||||||| || Sbjct 72937 AGGTCCATGAAGTCGAACGGGTTCGTGGCGCGGTAGTGCTTCTCGTTCCCGAGCGCGACG 72878 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 ||||| ||||| || || |||||||| ||||||||||||||| ||||||||||||||||| Sbjct 72877 AGCAGACGGTCCGCTACGAACTCGATATACTGGCACATGAGGTCGGCGTTCATGCCGATG 72818 Query 868871 AGCGCCACCGGCAGCGACTC 868890 |||| |||||||||| ||| Sbjct 72817 AGCGAGACCGGCAGCGCCTC 72798 Score = 149 bits (164), Expect = 8e-30 Identities = 186/253 (74%), Gaps = 3/253 (1%) Strand=Plus/Plus Query 869631 CCGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTT 869690 |||||||||||||||| || ||||||||||||||| ||| | |||| || | | Sbjct 70349 CCGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGTGCCTCGGCGGCCT 70408 Query 869691 GGACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGA 869750 ||||||| || |||||| || | ||||||||| |||||||||||| ||| |||| Sbjct 70409 GGACCTCATTGGAGAACCGCTCGACAAGGTTCTCGTTCACGATGCCGTCCGAGGCAGCGA 70468 Query 869751 AAAAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGA-GCG--ACACCCAGT 869807 | || || || |||||| ||| || || ||||| |||||| ||| ||| ||| | Sbjct 70469 AGAAGGCGAGCACGTGCGAGATGAAATGACGCTCATCGTCGTTGAGGCGGTTGTTCCAAT 70528 Query 869808 GGACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTT 869867 | | ||| | ||||||| ||||||||| ||||||| || ||||| ||||| | Sbjct 70529 CGTGGAGGTCCTTGGAAAGGTCCATCTCCTCGGCAGTCCAGAATGAAGCCTCAGCCTTCT 70588 Query 869868 TGTACATCTCCCA 869880 ||||||||| ||| Sbjct 70589 TGTACATCTGCCA 70601 Score = 143 bits (158), Expect = 3e-28 Identities = 185/255 (73%), Gaps = 3/255 (1%) Strand=Plus/Minus Query 869631 CCGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTT 869690 ||||||| | |||||||| |||||||||||| |||||| | | |||| || | | Sbjct 72345 CCGAGTGCACATTCTCGATCATGATCTGGAAGCCATAAAAGCAGCGCGCCTCGGCGGCCT 72286 Query 869691 GGACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGA 869750 | ||||| || |||||| || | || |||||| |||||||||||| |||||||| Sbjct 72285 GTACCTCGTTAGAGAACCGCTCGACGAGATTCTCGTTCACGATGCCGTCCGAGGCGGCGA 72226 Query 869751 AAAAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGC---GACACCCAGT 869807 | ||||| || |||| ||| ||||||||||||| || ||||| | ||||| Sbjct 72225 AGAAAGCAAGCACGTAGGAGATGAAGTGGCGCTCGTTTGCGTTGAGCTTGTAGTTCCAGT 72166 Query 869808 GGACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTT 869867 | | |||| | ||||| | ||||||| ||||||||| ||| || | ||| || | Sbjct 72165 CCATGAGGTCGTTGGCGAGGTTGATCTCCTCGACGGTCCAGAACGACGCTTGGGCGTTCT 72106 Query 869868 TGTACATCTCCCATA 869882 ||||||||| ||||| Sbjct 72105 TGTACATCTGCCATA 72091 Score = 136 bits (150), Expect = 5e-26 Identities = 190/258 (74%), Gaps = 19/258 (7%) Strand=Plus/Plus Query 869215 GAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAA 869274 ||| |||||||| |||||||||||||||||||| ||||||| | || || ||||| Sbjct 70104 GAGACCGGGCATCAGGCCGCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGAACCAGAGAA 70163 Query 869275 AAAGATGCCCTCGACGGCGGC-AAAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCT 869333 ||||| ||||| || || || |||||| | ||||||||| || |||| | || || Sbjct 70164 GAAGATACCCTCCACAGCCGCGAAAGCC-ACGAGCCGCTCCGCGAAGGCG--GA----CT 70216 Query 869334 CCTTGT---TGATCCACTTCATCGCCCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGT 869390 |||||| |||||| | || |||||||| ||||| ||| | | | || | ||| | Sbjct 70217 CCTTGTCAGAGATCCAGTGCAAAGCCCAGTCCGCCTTCTTCTTGATGCAAGGAATCGTCT 70276 Query 869391 CGATGGCG-CGAAAGAGGTGGTC---CTTTTCGGCCGGGTCCTTGACATAGGTGTCGATC 869446 |||||||| ||||| ||||| || || | | || ||||||| || |||||||| Sbjct 70277 CGATGGCGTCGAAA-AGGTGCTCGCGCTGCTTG---GGATCCTTGATGTACGTGTCGATG 70332 Query 869447 AGGAGCGAATAGGTCTCC 869464 || ||||| || |||||| Sbjct 70333 AGCAGCGAGTATGTCTCC 70350 Score = 132 bits (146), Expect = 6e-25 Identities = 135/176 (77%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 868700 TACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATC 868759 || ||| ||| ||| |||||| ||||| |||||||||| ||||||||||| ||||| Sbjct 69712 TAGTCGGACACCCGCTTCTCGAAGAAGTTTGTCTTGCCCTGGAGCGAGATCATGTCCATG 69771 Query 868760 CACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCGAGCAGGCGG 868819 | ||||||||||| | ||||||| ||| || ||||| | |||| || || Sbjct 69772 AAATCGAACGGGTTGGTCACGTTGTAGTACTTCTCATCGCCGAGAGCGACGAGAAGACGA 69831 Query 868820 TCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATGAGCGC 868875 || ||||| ||||||||||||||||||||||| | ||||||||||||||| || Sbjct 69832 TCAGCGACGAACTCGATGTACTGGCACATGAGCTTCGAGTTCATGCCGATGAGGGC 69887 Score = 109 bits (120), Expect = 7e-18 Identities = 197/286 (69%), Gaps = 3/286 (1%) Strand=Plus/Minus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 ||| ||||| || ||||| | ||||| || | | || ||||| | || ||||| Sbjct 72626 ACCCTCGTCTCGGCTGATAAGCTCGTTAGAGAACGTCAACCCCGGCATCAACCCCCGCTT 72567 Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298 ||| ||||| || |||||| ||| || ||||| || | ||||||||| || ||||| Sbjct 72566 CTTCAGCCAGAAAATGGCGGCGAACGACCCGGAGAAGAACACGCCCTCGACTGCCGCAAA 72507 Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGCCCA 869358 ||| |||| ||| ||||| || | ||| | | ||||| || |||||| Sbjct 72506 TGCGACCAGCCTCTCCGCAAACACT--GAA-CGCTCGTCCTCAATCCAGCGCAACGCCCA 72450 Query 869359 GTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTTTC 869418 ||| ||||| || | | |||| | |||||||||||| || ||| | ||| Sbjct 72449 GTCCGCCTTCTTACGGATACACGGGATGGTGTCGATGGCGTCGAACAGGAACGCGCGTTC 72390 Query 869419 GGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTCC 869464 || |||||||||| ||| |||||||| || ||||| || |||||| Sbjct 72389 AGCGGGGTCCTTGATATACGTGTCGATGAGCAGCGAGTACGTCTCC 72344 >seq2779 Length=81362 Score = 125 bits (138), Expect = 9e-23 Identities = 119/148 (80%), Gaps = 3/148 (2%) Strand=Plus/Plus Query 19053 ATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG-CCGTG 19111 ||||| |||||||||||||||||| || |||||| || || ||||||||| ||||| Sbjct 18110 ATCGGGGGCACGGTGACGTGCGTGATCCGGCGCGTGCCCGCGGGGCTCGGCGAGCCCGTG 18169 Query 19112 CTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACCAAGGG 19171 || |||||| ||||||| |||||| ||||||||||| || ||||| || || |||| Sbjct 18170 -TTCGACAAGCTCGAGGCGCAGCTCGCGCACGCCATGCTCTCCATCCCCGCGACGAAGGC 18228 Query 19172 ATTCGAGATTGGCAGCGGGTTT-GCGGG 19198 ||||||||| ||| ||| ||| ||||| Sbjct 18229 ATTCGAGATCGGCTCCGGCTTTCGCGGG 18256 >seq5619 Length=11060 Score = 98.7 bits (108), Expect = 1e-14 Identities = 96/124 (77%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 1627864 AACACGTCGGCGAGGCCCTGCACGCCGACGCCCATCGGCCGGTGGCGCAGGTTCGAGTGG 1627923 ||| ||||||| || ||||||||||||| || || || |||||||||| ||| || | Sbjct 2231 AACGCGTCGGCCAGACCCTGCACGCCGATTCCGATGGGGCGGTGGCGCATGTTGGAACGA 2290 Query 1627924 CGGGCCTCGGGCACCGGGTAGTGGTTGATGTCGATCACGCGGTTGAGGTTGCCCACCACG 1627983 || ||||| || | || |||||||||| |||||| | |||||| |||||| | | || Sbjct 2291 CGCGCCTCCGGAATAGGATAGTGGTTGACGTCGATGATGCGGTTCAGGTTGAACGCGACC 2350 Query 1627984 ACCT 1627987 |||| Sbjct 2351 ACCT 2354 Score = 98.7 bits (108), Expect = 1e-14 Identities = 131/182 (72%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 1630183 CCGATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCC 1630242 || || |||||||| | ||| ||| | ||| || | ||||| || |||||||||| Sbjct 3174 CCAATACCGCCGGCGGTTTTGCTGATCATCGCACAATCCTTGAGAGTCGAGTAGATGCCC 3233 Query 1630243 TCGATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTG 1630302 ||||| |||||| |||||||| ||| |||||||| || || |||| | ||| Sbjct 3234 TCGATGGAGTCGTCCTTCATGCACACAAGAAAGCATGAACTCAGCTGGGGGTTGGGAGTG 3293 Query 1630303 CCGGCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACTGCCGCGACATGGCGTCGTAG 1630362 ||||||||||| || ||||||| || |||||| || || |||||| || |||| Sbjct 3294 CCGGCGTTGAAAAGGGTGGGCGATGCATGGGTGAAGTACCGCTCCGACATCAGGTGGTAG 3353 Query 1630363 GT 1630364 || Sbjct 3354 GT 3355 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106347439938416