Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000787515.1_202014-11-26] 9,648 sequences; 31,621,284 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq3971 123 2e-23 >seq3971 Length=41844 Score = 123 bits (136), Expect = 2e-23 Identities = 185/263 (70%), Gaps = 0/263 (0%) Strand=Plus/Plus Query 34311 GATGAGCTCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACC 34370 |||||| || ||||| || || | ||| || || | || ||||| ||||||| | Sbjct 1424 GATGAGGTCCGTCTCGGGATTCTTGCATGCCTTGCAAAGTACGAACTTCTCGATGAAAAC 1483 Query 34371 ATCAAGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTT 34430 |||||| || || | | ||| || ||| || | ||||| |||||| | || ||||| Sbjct 1484 ATCAAGTAGCTCGCGCAGCTTTTTGGCGTCATGCGCCCCGTTCACGATGTAGCGGTCGTT 1543 Query 34431 TTTGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAAT 34490 || | |||| ||| || ||||| ||||||||||||||| |||| || || || | Sbjct 1544 CTTCTCGTCGAAGGACGTCTGAGCGCCGAGCTCGCACCCGAAGAACTTGGTGGGATAGGT 1603 Query 34491 GGCCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCC 34550 || ||| | | || || || | |||| ||||||| ||||||||||||||||| Sbjct 1604 GGGCGGCCTACTGAGGGCGCGCGCCACGTCGGACATGTTGGGAATGACAGTCTTGATGCC 1663 Query 34551 GTTGCCCTTTCCTTCGACCTTGG 34573 ||||| || || || | ||||| Sbjct 1664 ATTGCCTTTGCCCTCAATCTTGG 1686 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412793056020464