Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000787515.1_202014-11-26] 9,648 sequences; 31,621,284 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq1153 140 2e-28 seq7597 132 3e-26 >seq1153 Length=45894 Score = 140 bits (154), Expect = 2e-28 Identities = 155/207 (75%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 34772 AGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGT 34831 ||||||| ||||||||||||||| ||||| ||||| || | | |||| |||| || || Sbjct 2308 AGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGACAAGGTGCGACCATCCTCAAGC 2367 Query 34832 TGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATT 34891 ||||| || ||||||||||| || |||||||| |||| | ||||||||||| | || Sbjct 2368 TGCTTGCCAGCGAAGATCAGACGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGAATC 2427 Query 34892 TTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCC 34951 || || ||| | |||| || | |||||| || | || |||||||| ||| Sbjct 2428 TTCGCCTTCACGTTGTCGATCGTGTCGGAAGACTCGACCTCGAGAGTGATGGTCTTCCCC 2487 Query 34952 GTGAGGGTCTTTACAAAGATCTGCATG 34978 || | ||||| ||||||||||||||| Sbjct 2488 GTCAACGTCTTGACAAAGATCTGCATG 2514 Score = 120 bits (132), Expect = 2e-22 Identities = 154/210 (73%), Gaps = 8/210 (4%) Strand=Plus/Plus Query 34772 AGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGT 34831 ||||| | ||||||||||||||||||||||| || || ||| | || |||| |||||| Sbjct 2587 AGGTGGAGAGTGCTCTCCTTCTGAATGTTATAATCGGAGAGGGTACGACCATCCTCCAGT 2646 Query 34832 TGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATT 34891 ||||| || || ||||| || || |||||||| | || | ||||||||||| | || Sbjct 2647 TGCTTGCCAGCAAAGATGAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTGGATC 2706 Query 34892 TTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTT 34947 || || || || | ||||| || | |||||| || | ||| |||||||| Sbjct 2707 TTAGCCTTCAC--AT--TGTCGATGGTGTCCGACGACTCGACCTCGAGGGTGATGGTCTT 2762 Query 34948 TCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || | ||||| |||||||||||||| Sbjct 2763 GCCGGTCAAAGTCTTGACAAAGATCTGCAT 2792 Score = 118 bits (130), Expect = 7e-22 Identities = 157/216 (73%), Gaps = 8/216 (4%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||||| ||| ||||||||| ||||| |||||||| || |||| |||| Sbjct 1786 AGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGCGTGCGGCCATCC 1845 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| ||||||||||| || || |||||||| |||| | ||||||||||| Sbjct 1846 TCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGCGGGATACCCTCCTTGTCC 1905 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || || || || || | ||||| || | |||||| || | || || Sbjct 1906 TGGATCTTCGCCTTCAC--AT--TGTCGATGGTGTCCGACGACTCGACCTCGAGAGTGAT 1961 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 |||||| || || || ||||| || ||||| ||||| Sbjct 1962 GGTCTTGCCGGTCAGAGTCTTAACGAAGATTTGCAT 1997 Score = 113 bits (124), Expect = 3e-20 Identities = 156/216 (72%), Gaps = 8/216 (4%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||| | || ||||||||||||||| ||||| || || |||| | || Sbjct 2014 AGGACAAGGTGGAGCGTCGACTCCTTCTGAATGTTGTAGTCAGAGAGCGTGCGGCCGTCC 2073 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || |||||||| || || |||||||| || |||||||| | || | |||||||| || Sbjct 2074 TCGAGTTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGGATACCCTCCTTATCC 2133 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATT-CATTGGCC---TCGACATCAACGGTTAT 34941 | || ||| ||||| | | |||||| || | | || || || | ||| || Sbjct 2134 TGGATCTTTGCCTTGAC----GTTGTCGATTGTATCCGACGATTCAACCTCCAAGGTGAT 2189 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| |||||||||||||| || ||||| ||||| Sbjct 2190 CGTCTTACCCGTGAGGGTCTTGACGAAGATTTGCAT 2225 >seq7597 Length=53330 Score = 132 bits (146), Expect = 3e-26 Identities = 157/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| || || | ||| ||||||||| ||||| ||||| || ||| |||| | || Sbjct 51542 AGGACAAGATGGAGGGTAGACTCCTTCTGGATGTTGTAGTCTGAGAGGGTGCGTCCGTCC 51483 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| ||||| ||||||||||| || ||||||||||| | || | ||||||||||| Sbjct 51482 TCCAGCTGCTTGCCGGCGAAGATAAGACGTTGCTGGTCGGGAGGGATACCCTCCTTGTCC 51423 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | || | ||| || |||| ||| || ||| Sbjct 51422 TGAATCTTCGCCTTGACGTTGTCAATGGTGTCTGACGACTCAACCTCAAGGGTGATCGTC 51363 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || |||||||||||||| || || ||||||||| Sbjct 51362 TTCCCCGTGAGGGTCTTGACGAAAATCTGCATG 51330 Score = 129 bits (142), Expect = 4e-25 Identities = 157/214 (73%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 |||||| || || | |||| ||||||||| ||||| ||||| || || | ||| | || Sbjct 52280 CAGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGCGTACGCCCGTC 52221 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 |||| ||||| || |||||||| || || ||||| || | || | ||||||||||| Sbjct 52220 CTCCAACTGCTTCCCCGCGAAGATGAGGCGCTGCTGATCCGGAGGGATGCCCTCCTTGTC 52161 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 | || || |||||| | |||| || | |||||| || | || ||||| Sbjct 52160 CTGGATCTTCGCCTTGACGTTGTCGATCGTGTCGGAAGACTCGACCTCCAACGTAATGGT 52101 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 ||||||||| |||||||| ||||||||||||||| Sbjct 52100 CTTTCCCGTAAGGGTCTTGACAAAGATCTGCATG 52067 Score = 111 bits (122), Expect = 1e-19 Identities = 155/217 (71%), Gaps = 8/217 (4%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||| ||||| ||| ||||||||| ||||| || ||||| | | | || | || Sbjct 52051 AGGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGACAAGGTACGGCCGTCC 51992 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 ||||| |||||||| |||||||| || || |||||||| | || | ||||||||||| Sbjct 51991 TCCAGCTGCTTTCCAGCGAAGATAAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCT 51932 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || || || || | ||||||| || | |||||| |||| || || Sbjct 51931 TGGATCTTCGCCTTCAC----GTTATCGATGGTATCCGACGACTCGACCTCAAGCGTGAT 51876 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 |||||| || || | ||||| || ||||| |||||| Sbjct 51875 GGTCTTGCCAGTCAACGTCTTCACGAAGATTTGCATG 51839 Score = 87.8 bits (96), Expect = 1e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 34772 AGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGT 34831 ||||| | ||| ||||||||| ||||| || || || | | | ||| |||| || || Sbjct 51764 AGGTGGAGAGTGGACTCCTTCTGGATGTTGTAATCGGACAAGGTCCGCCCATCCTCAAGC 51705 Query 34832 TGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATT 34891 ||||| || |||||||||| || ||||| || | || | ||||||||||| | || Sbjct 51704 TGCTTGCCAGCGAAGATCAAGCGCTGCTGATCAGGGGGAATGCCCTCCTTGTCCTGAATC 51645 Query 34892 TTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCC 34951 || || ||| | || | || || ||||| |||| || || ||||| || Sbjct 51644 TTCGCCTTTACGTTGTCGATGGTATCGGAGGATTCGACCTCAAGAGTGATAGTCTTGCCG 51585 Query 34952 GTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || || || ||||||||||| Sbjct 51584 GTAAGCGTTTTCACGAAGATCTGCAT 51559 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325654503412112