Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000787515.1_202014-11-26] 9,648 sequences; 31,621,284 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq1153 93.3 3e-14 >seq1153 Length=45894 Score = 93.3 bits (102), Expect = 3e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 29596 TCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATAT 29655 || || |||||||||||||| | | ||| ||| ||| || ||||| ||||||||| | Sbjct 2602 TCCTTCTGAATGTTATAATCGGAGAGGGTACGACCATCCTCCAGTTGCTTGCCAGCAAAG 2661 Query 29656 ATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTT 29715 || | | ||||| || || || |||||||| ||||| || | || || ||| | Sbjct 2662 ATGAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTGGATCTTAGCCTTCACATTG 2721 Query 29716 TCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACA 29775 || | ||||| || || || || || || || || ||||| || || || || ||| Sbjct 2722 TCGATGGTGTCCGACGACTCGACCTCGAGGGTGATGGTCTTGCCGGTCAAAGTCTTGACA 2781 Query 29776 AATATCTGCAT 29786 || |||||||| Sbjct 2782 AAGATCTGCAT 2792 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385173904000368