Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000787515.1_202014-11-26] 9,648 sequences; 31,621,284 total letters Query= NC_023848.1 Length=163023 Score E Sequences producing significant alignments: (Bits) Value seq8570 86.0 7e-12 >seq8570 Length=955 Score = 86.0 bits (94), Expect = 7e-12 Identities = 114/156 (73%), Gaps = 2/156 (1%) Strand=Plus/Minus Query 21743 CGCATACCCGAAATAGGCGACAAGTTCTGTTC-CGGCATGGCCCAGAAAGGCACCTGCGG 21801 || ||||| | || |||||||||||| ||| || || || | |||| || ||| ||| Sbjct 657 CGTATACCACAGATCGGCGACAAGTTCGCTTCGCGTCACGGTC-AGAAGGGTACCATCGG 599 Query 21802 GATGATCTATTCGCAAGAAAACATGCCATTCACATCTTCCGGCATGACCCCCGACATCAT 21861 || | ||| || || ||||||| ||||| | ||||| || ||||||||||| Sbjct 598 TATCACCTACCGCCAGGAGGACATGCCGTTCACGGCGGAGGGCATCACGCCCGACATCAT 539 Query 21862 CATCAACCCCAACTGCATTCCCTCCAGAATGACCAT 21897 |||||||||| || ||||||||| | ||||| || Sbjct 538 CATCAACCCCCACGCCATTCCCTCTCGTATGACAAT 503 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521482701600640