Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000787515.1_202014-11-26] 9,648 sequences; 31,621,284 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq5619 165 8e-36 seq1153 131 2e-25 seq7597 122 8e-23 seq38 113 4e-20 seq2399 82.4 7e-11 >seq5619 Length=11060 Score = 165 bits (182), Expect = 8e-36 Identities = 404/599 (67%), Gaps = 20/599 (3%) Strand=Plus/Plus Query 148329 TCGTTGTTGCCCAAAATCTGCGCGGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAG 148388 ||||||||||| | ||||| |||| || || ||||| || || ||||| ||| Sbjct 1922 TCGTTGTTGCCGAGGATCTGACTCGTCGAGGCGGTAGGCATCGGAGCGACAAGCAGGGAG 1981 Query 148389 TTGCGCAAACCGCGATTTTTTAT-TTTGCGCTTCAGAGC-CGCCCAGTCCCAGAG--CGG 148444 || || | |||| | | | ||||| ||||| ||| |||||||||||| || ||| Sbjct 1982 TTCCGAAGACCGTACTGTGCGACCTTTGC-CTTCA-AGCTCGCCCAGTCCCATAGATCGG 2039 Query 148445 CGACGGTGTCACGTTCCACATGTCGTACTGCAGAATGCCGCGGCTAGCGGGGCTGCCCTC 148504 | || || | ||| | ||| || || || |||| | || |||||||||| Sbjct 2040 TG--GGAGTGATCCCCCATAGGTCATATTGGAGCTTGCCCTCGGACGCTGGGCTGCCCTG 2097 Query 148505 GTACGAGCTGTACGGTCCGTGCGCCGCCGCCAGTTCGCAGCTCGCCTCGAGCGCGCCGTA 148564 ||||| ||| || || | || ||||| || |||||||| || | ||| | | Sbjct 2098 GTACGTCTCGTAAGGGCCAAACTCCTTCGCCATCTCACAGCTCGCTTCAACAGCGGCATG 2157 Query 148565 GTAAATCGTCTCGGCAATTTGCCTGTTGAGCA---GCGCCGCCGACTCGCTTTCGTACGG 148621 ||| || || ||| || ||| ||||||| | ||| | | | | || |||| Sbjct 2158 GTAGATGGTTTCGAAGATCTGCAGGTTGAGCCTGCGTGCCTCGGGCGAG---TCAAACGG 2214 Query 148622 CATACGCAGCCGCACAAACGCGTCGGCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTG 148681 ||| ||||| || ||||||||||| || ||||| ||||| | || ||||| ||||| Sbjct 2215 CATGCGCAGGGCCATGAACGCGTCGGCCAGACCCTGCACGCCGATTCCGATGGGGCGGTG 2274 Query 148682 TTTAATGTTGGAGAGGCGCGCGCTCTCG-AGCGGATAGTGGTTGCGGTCGATGATCTTGT 148740 |||||||| | ||||| ||| | | |||||||||||| ||||||||| || Sbjct 2275 GCGCATGTTGGAACGACGCGC-CTCCGGAATAGGATAGTGGTTGACGTCGATGATGCGGT 2333 Query 148741 CAAGATTGCGCACCACCACCTTTGTAATTCTGCGCAGCAATTCAAAATCGTACTTGTCAT 148800 || ||| | | |||||||| || | | ||| | | |||| ||||||| ||| Sbjct 2334 TCAGGTTGAACGCGACCACCTTGGTCACGTCGTGCAACTTCTGGAAATTGTACTTGCCAT 2393 Query 148801 CTACGATGCA--TCGGTTCACGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGG 148858 ||||| | ||| | |||||||| || |||||||| || ||||||||||| || Sbjct 2394 TCTCGATGAAGGACGG--GAGCGCGATAGACGCGAGATTGCAGACAGCCGTCTCATCGGG 2451 Query 148859 GGCGCTGTACTCTACGATCTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCT 148917 | |||||| || ||||||| ||| |||||| | |||||| ||| | ||||| Sbjct 2452 AGACGAGTACTCGACAATCTCGGTGCAGAGATTGGACGACTTGATCGTGCCGAGGTTCT 2510 >seq1153 Length=45894 Score = 131 bits (144), Expect = 2e-25 Identities = 150/199 (75%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||| ||||| ||||| || ||||| || | |||| | | | |||||||||||||||| Sbjct 1800 GGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGCGTGCGGCCA-TCCTCGAGCTGCTTGC 1858 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| | ||||| |||||||||||||| ||||| || |||||||| |||||| || Sbjct 1859 CGGCGAAGATGAGGCGCTGCTGGTCGGGCGGGATACCCTCCTTGTCCTGGATCTTCGCCT 1918 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | || | ||||| | | ||| || |||| |||| ||| ||||||||||||| Sbjct 1919 TCACATTGTCGATGGTGTCCGACGACTCGACCTCGAGAGTGATGGTCTTGCCGGTCAGAG 1978 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || ||||| || ||||| Sbjct 1979 TCTTAACGAAGATTTGCAT 1997 Score = 120 bits (132), Expect = 3e-22 Identities = 148/200 (74%), Gaps = 2/200 (1%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 |||| ||| ||||| || ||||| ||| || ||| ||| | ||||| |||||||||| Sbjct 2316 GGTGCTCTCCTTCTGGATGTTGTAGTCGGACAAGGTGCGACCA-TCCTCAAGCTGCTTGC 2374 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| | || || |||||||||||||| |||||||| |||||||| ||||| || Sbjct 2375 CAGCGAAGATCAGACGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGAATCTTCGCCT 2434 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | || | |||||||| | ||| || |||| |||| ||| || || |||| | Sbjct 2435 TCACGTTGTCGATCGTGTCGGAAGACTCGACCTCGAGAGTGATGGTCTTCCCCGTCAACG 2494 Query 133642 TTTTTACGAAAATCTGCATG 133661 | || || || ||||||||| Sbjct 2495 TCTTGACAAAGATCTGCATG 2514 Score = 111 bits (122), Expect = 2e-19 Identities = 142/193 (74%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 133469 CTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCGCGT 133527 ||| ||||| || || |||||| | || ||| | ||||| || |||||||| || Sbjct 2601 CTCCTTCTGAATGTTATAATCGGAGAGGGTACGACCA-TCCTCCAGTTGCTTGCCAGCAA 2659 Query 133528 AAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGAGCT 133587 | ||||| ||||||||||| |||||||| || |||||||| |||||| ||| | | Sbjct 2660 AGATGAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTGGATCTTAGCCTTCACAT 2719 Query 133588 GCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTTTTA 133647 || | ||||| | | ||| || |||| ||||| ||| |||||||||| ||| || | Sbjct 2720 TGTCGATGGTGTCCGACGACTCGACCTCGAGGGTGATGGTCTTGCCGGTCAAAGTCTTGA 2779 Query 133648 CGAAAATCTGCAT 133660 | || |||||||| Sbjct 2780 CAAAGATCTGCAT 2792 Score = 89.7 bits (98), Expect = 5e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || ||||| ||||| || ||||| || | |||| ||||||||| |||||||| Sbjct 2029 GTCGACTCCTTCTGAATGTTGTAGTCAGAGAGCGTGCGGCCGTCCTCGAGTTGCTTGCCA 2088 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 || | || || ||||||||||| |||||||| || ||||| || ||||||| |||| Sbjct 2089 GCAAAGATCAGGCGCTGCTGGTCCGGAGGGATACCCTCCTTATCCTGGATCTTTGCCTTG 2148 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | || | || || | | || || || | ||||| || || || || || || Sbjct 2149 ACGTTGTCGATTGTATCCGACGATTCAACCTCCAAGGTGATCGTCTTACCCGTGAGGGTC 2208 Query 133644 TTTACGAAAATCTGCAT 133660 || ||||| || ||||| Sbjct 2209 TTGACGAAGATTTGCAT 2225 >seq7597 Length=53330 Score = 122 bits (134), Expect = 8e-23 Identities = 150/205 (73%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTG 133516 ||| | ||||||||| ||||| || ||||| ||| | ||| | |||||| | ||| Sbjct 52271 ATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGCGTACGCCCGTCCTCCAACTG 52212 Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576 ||| |||||| | ||||| |||||||| || ||||||||||| |||||||| |||||| Sbjct 52211 CTTCCCCGCGAAGATGAGGCGCTGCTGATCCGGAGGGATGCCCTCCTTGTCCTGGATCTT 52152 Query 133577 TTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 ||||| | || | |||||||| | ||| || || | || | ||| || || || Sbjct 52151 CGCCTTGACGTTGTCGATCGTGTCGGAAGACTCGACCTCCAACGTAATGGTCTTTCCCGT 52092 Query 133637 CAGAGTTTTTACGAAAATCTGCATG 133661 || || || || || ||||||||| Sbjct 52091 AAGGGTCTTGACAAAGATCTGCATG 52067 Score = 113 bits (124), Expect = 4e-20 Identities = 148/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTG 133516 ||| | ||| ||||| ||||| || ||||| || | ||| |||||| ||||| Sbjct 51534 ATGGAGGGTAGACTCCTTCTGGATGTTGTAGTCTGAGAGGGTGCGTCCGTCCTCCAGCTG 51475 Query 133517 CTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576 |||||| ||| | || || || ||||||||||||||||| || |||||||| ||||| Sbjct 51474 CTTGCCGGCGAAGATAAGACGTTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGAATCTT 51415 Query 133577 TTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 ||||| | |||| ||||| | | ||| || || | ||||| || || || || Sbjct 51414 CGCCTTGACGTTGTCAATGGTGTCTGACGACTCAACCTCAAGGGTGATCGTCTTCCCCGT 51355 Query 133637 CAGAGTTTTTACGAAAATCTGCATG 133661 || || || ||||||||||||||| Sbjct 51354 GAGGGTCTTGACGAAAATCTGCATG 51330 Score = 111 bits (122), Expect = 2e-19 Identities = 153/212 (72%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGA 133512 || || | ||| ||||| ||||| || |||||||| || || ||| |||||| | Sbjct 52045 AAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGACAAGGT--ACGGCCGTCCTCCA 51988 Query 133513 GCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGA 133572 ||||||| || ||| | || || ||||||||||||||||||||||| |||||||| || Sbjct 51987 GCTGCTTTCCAGCGAAGATAAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCTTGGA 51928 Query 133573 TCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632 |||| ||| | | || | || || | | ||| || || | |||| ||| |||| Sbjct 51927 TCTTCGCCTTCACGTTATCGATGGTATCCGACGACTCGACCTCAAGCGTGATGGTCTTGC 51868 Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCATGGCT 133664 | |||| || || ||||| || |||||| || Sbjct 51867 CAGTCAACGTCTTCACGAAGATTTGCATGCCT 51836 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 |||||||| ||||| || ||||||||| || || | ||||| ||||||||||| Sbjct 51755 GTGGACTCCTTCTGGATGTTGTAATCGGACAAGGTCCGCCCATCCTCAAGCTGCTTGCCA 51696 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| | || | |||||||| || || || ||||| |||||||| ||||| ||| Sbjct 51695 GCGAAGATCAAGCGCTGCTGATCAGGGGGAATGCCCTCCTTGTCCTGAATCTTCGCCTTT 51636 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | || | || |||| || || || || | |||| || |||||||| || ||| Sbjct 51635 ACGTTGTCGATGGTATCGGAGGATTCGACCTCAAGAGTGATAGTCTTGCCGGTAAGCGTT 51576 Query 133644 TTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 51575 TTCACGAAGATCTGCAT 51559 >seq38 Length=96116 Score = 113 bits (124), Expect = 4e-20 Identities = 139/190 (73%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 120354 GTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTTCAT 120413 ||||||| |||||||||||| || ||||| || ||||||| | ||| ||| || ||| Sbjct 72989 GTACTCGGAGACGCGTTTCTCGAAGAAGTTGGTCTTGCCCTGGAGCGAGATGAGGTCCAT 72930 Query 120414 AAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAGTCG 120473 || ||||||||||| | ||| ||| ||| | || | | |||||||| || Sbjct 72929 GAAGTCGAACGGGTTCGTGGCGCGGTAGTGCTTCTCGTTCCCGAGCGCGACGAGCAGACG 72870 Query 120474 GTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGCCAC 120533 ||||||||| ||||| || |||| ||||||| | ||||||||||| | | || || Sbjct 72869 GTCCGCTACGAACTCGATATACTGGCACATGAGGTCGGCGTTCATGCCGATGAGCGAGAC 72810 Query 120534 CGGCAACGCC 120543 ||||| |||| Sbjct 72809 CGGCAGCGCC 72800 Score = 102 bits (112), Expect = 8e-17 Identities = 311/478 (65%), Gaps = 6/478 (1%) Strand=Plus/Minus Query 120640 AGGCACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTC 120699 || ||||||||||| ||||||| |||||||| || || |||||||| |||||| Sbjct 72649 AGACACGCAAAGTCGGTGTGCATACCCTCGTCTCGGCTGATAAGCTCGTTAGAGAACGTC 72590 Query 120700 AGGCCGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAG 120759 | || ||||| | || | |||| | |||| |||||||| || || || ||| Sbjct 72589 AACCCCGGCATCAACCCCCGCTTCTTCAGCCAGAAAATGGCGGCGAACGACCCGGAGAAG 72530 Query 120760 AACACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTG 120819 ||||||||||| || ||||| ||||||| | ||| || ||| | || | Sbjct 72529 AACACGCCCTCGACTGCCGCAAATGCGACCAGCCTCTCCGCAAACACTGAACGCTCGTCC 72470 Query 120820 TCGATCCACTTCATGGCCCACTCGGCCTTTTTGCGCACGCACGGCATCCGCTCGAACGCG 120879 || ||||| || ||||| || ||||| || || | ||||| || |||| ||| Sbjct 72469 TCAATCCAGCGCAACGCCCAGTCCGCCTTCTTACGGATACACGGGATGGTGTCGATGGCG 72410 Query 120880 TTCAGCAGCATGTCGCGCTCGCCCTCCTCCGCAATCAGCTGATGGATGAGCAGATTGTAC 120939 | | ||| | |||| || | ||| || | | ||||||||| |||| Sbjct 72409 TCGAACAGGAACGCGCGTTCAGCGGGGTCCTTGATATACGTGTCGATGAGCAGCGAGTAC 72350 Query 120940 ATTTCCGTGTGCACGCACTCGATCAGCACTTGCTGGTTGTAAAAGTACTGCGCCTCCAGC 120999 | |||| |||||| |||||||| | || | |||||| | ||||||| Sbjct 72349 GTCTCCGAGTGCACATTCTCGATCATGATCTGGAAGCCATAAAAGCAGCGCGCCTCGGCG 72290 Query 121000 TCGGGCACCGCCCGCTGCATGTA---CTCGATAAGGTTAATATTCACGATACTGTCGGCG 121056 | | || | || | | | | ||||| || || |||||||| | ||| | | Sbjct 72289 GCCTGTAC--CTCGTTAGA-GAACCGCTCGACGAGATTCTCGTTCACGATGCCGTCCGAG 72233 Query 121057 GCGGCGAAGAACGCCAGCACGTGCTTGATAAAGTGTCGCTCGTCGTCCGTGAGCTTGT 121114 ||||||||||| || ||||||| ||| ||||| ||||||| | ||||||||| Sbjct 72232 GCGGCGAAGAAAGCAAGCACGTAGGAGATGAAGTGGCGCTCGTTTGCGTTGAGCTTGT 72175 Score = 100 bits (110), Expect = 3e-16 Identities = 117/158 (74%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 120364 ACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTTCATAAACTCGAAC 120423 || || ||||| || |||||||| ||||||| | ||| || ||| ||| || |||||| Sbjct 69721 ACCCGCTTCTCGAAGAAGTTTGTCTTGCCCTGGAGCGAGATCATGTCCATGAAATCGAAC 69780 Query 120424 GGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAGTCGGTCCGCTACA 120483 |||||| || |||| |||| ||| | ||| | ||||| || || || || || Sbjct 69781 GGGTTGGTCACGTTGTAGTACTTCTCATCGCCGAGAGCGACGAGAAGACGATCAGCGACG 69840 Query 120484 AACTCAATGTACTCGCACATGGACTGCGCGTTCATGCC 120521 ||||| ||||||| ||||||| || || ||||||||| Sbjct 69841 AACTCGATGTACTGGCACATGAGCTTCGAGTTCATGCC 69878 >seq2399 Length=624 Score = 82.4 bits (90), Expect = 7e-11 Identities = 74/93 (80%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 ||||||||| ||||| || ||||| |||| | ||| |||||||||||||||||| Sbjct 413 GGTGGACTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGGCCGTCCTCGAGCTGCTTGCC 354 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGAT 133555 |||| | || || |||||||||||||| || || Sbjct 353 CGCGAAGATCAGGCGCTGCTGGTCGGGGGGAAT 321 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483362499451520