Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000787515.1_202014-11-26] 9,648 sequences; 31,621,284 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq38 86.0 6e-12 >seq38 Length=96116 Score = 86.0 bits (94), Expect = 6e-12 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 46834 TGGTGGCATTCGCGATAGTCGAAGGCGTGtttttttCGGGCAGTTTTGCCGCCATTTTTT 46893 |||| ||||| ||| |||||| |||||||| || || || || ||||||||||| | Sbjct 72499 TGGTCGCATTTGCGGCAGTCGAGGGCGTGTTCTTCTCCGGGTCGTTCGCCGCCATTTTCT 72558 Query 46894 ACATTAAAACCAAAGGCATAATGCCGGGCCTGACGTTCAGTAACGAGTTGATCTCGCGCG 46953 | || | || | |||||||| |||||||| ||||||| | ||| || | Sbjct 72559 GGCTGAAGAAGCGGGGGTTGATGCCGGGGTTGACGTTCTCTAACGAGCTTATCAGCCGAG 72618 Query 46954 ACGAAGGACTACACACGGACTTTGCGTGTCTC 46985 |||| || | ||||| ||||||||||||||| Sbjct 72619 ACGAGGGTATGCACACCGACTTTGCGTGTCTC 72650 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476553720689280