Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000787515.1_202014-11-26] 9,648 sequences; 31,621,284 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq38 89.7 5e-13 >seq38 Length=96116 Score = 89.7 bits (98), Expect = 5e-13 Identities = 128/178 (72%), Gaps = 2/178 (1%) Strand=Plus/Plus Query 110712 GCTCGATGATATTATTGTTCACGATGACGTCGGCGGCAGCGAAAAAGGCGAGAACGTGTT 110771 |||||| | || | |||||||||| |||| | ||||||||| |||||||| ||||| Sbjct 70427 GCTCGACAAGGTTCTCGTTCACGATGCCGTCCGAGGCAGCGAAGAAGGCGAGCACGTGCG 70486 Query 110772 TAA-GAAAGAATCGTTCCTTGTCGTTCAGTTTATTGTTCCAGTCTTCAAAGTCCTTGGAC 110830 | |||| | || || | |||||| || |||||||| || | | ||||||||| Sbjct 70487 AGATGAAATGA-CGCTCATCGTCGTTGAGGCGGTTGTTCCAATCGTGGAGGTCCTTGGAA 70545 Query 110831 ATGTCGATCTCTTCGACCTTCCAGTGACAATCGACCGCCTTCTTGTACGATTGCCAAA 110888 | ||| ||||| ||| | ||||| || | | |||||||||||| ||||||| Sbjct 70546 AGGTCCATCTCCTCGGCAGTCCAGAATGAAGCCTCAGCCTTCTTGTACATCTGCCAAA 70603 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445040721615360