Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000787515.1_202014-11-26] 9,648 sequences; 31,621,284 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq2039 107 2e-18 >seq2039 Length=45597 Score = 107 bits (118), Expect = 2e-18 Identities = 208/301 (69%), Gaps = 12/301 (4%) Strand=Plus/Minus Query 146800 GGGTGCGGGTGGTAGCCCTCGAGGGCAAAATCTTCTGCCCTGAAATCGTCTATGTCCTCC 146859 |||||||| | ||||||||| | |||| || || | |||| || || |||| || Sbjct 9019 GGGTGCGGATCGTAGCCCTCTACAACAAAGTCCTCCATCGTGAAGTCATCGATGTTGTCT 8960 Query 146860 ACC---CGCCTCAAAATCTTGAGCTTGGGGAAGGGTCGGGGGTTCCTGGCCAGCTGAATT 146916 ||| |||| | | || | |||||||| || || || | || | ||||||| Sbjct 8959 ACCTTGCGCCGCCA--TCGA-ATTTTGGGGAAAGGCCGCGGCTCCCGCTCGAGCTGAACC 8903 Query 146917 TTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCC 146976 || || | || || |||| | |||||||||||||||| || || || | || | | Sbjct 8902 TTGAGCGCGTCGACATGGTCGCGGTAGACGTGCGCGTCGCCGAGC---TGGATAATGAGC 8846 Query 146977 CCCGGC--TTAAG-GCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCT 147033 | | || | | |||| ||||| |||||||| | ||||||||| | ||| ||| Sbjct 8845 TCTTGAGGTTCGGTGTCGGTGACGTGCGCCACCATATGGGTGAGCAGGGCGTAAGAGGCG 8786 Query 147034 ATGTTGAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGC 147093 ||||||||||||| || ||||||| ||| | || | |||||||| | | || |||||| Sbjct 8785 ATGTTGAAGGGGATACCGAGGCCCAGGTCGGCGGAGCGCTGGTACATCAGACAGGAGAGC 8726 Query 147094 T 147094 | Sbjct 8725 T 8725 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583417631347200