Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000787515.1_202014-11-26] 9,648 sequences; 31,621,284 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq1153 129 6e-25 seq5619 118 1e-21 seq7597 114 1e-20 seq2399 91.5 1e-13 seq6239 84.2 2e-11 >seq1153 Length=45894 Score = 129 bits (142), Expect = 6e-25 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 |||||||| || || || ||||| || ||||||||||| || ||| | || ||| Sbjct 1789 ACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGCGTGCGGCCATCCTCG 1848 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| ||||| || || || | |||||||| |||||||| || || || || || || Sbjct 1849 AGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGCGGGATACCCTCCTTGTCCTGG 1908 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || || || || ||| | ||||| ||||| || || |||||||| ||||| || Sbjct 1909 ATCTTCGCCTTCACATTGTCGATGGTGTCCGACGACTCGACCTCGAGAGTGATGGTCTTG 1968 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| | ||| |||||||| |||||||| Sbjct 1969 CCGGTCAGAGTCTTAACGAAGATTTGCAT 1997 Score = 123 bits (136), Expect = 3e-23 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 134508 AGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGC 134567 ||||| || ||| ||||| || |||||||||||| | |||| || || || ||| Sbjct 2308 AGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGACAAGGTGCGACCATCCTCAAGC 2367 Query 134568 TGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATT 134627 || ||||| || || |||| ||||||||| |||||||| ||||| || || || ||||| Sbjct 2368 TGCTTGCCAGCGAAGATCAGACGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGAATC 2427 Query 134628 TTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCG 134687 || || || ||| | |||||||| || || || |||||||| ||||| || || Sbjct 2428 TTCGCCTTCACGTTGTCGATCGTGTCGGAAGACTCGACCTCGAGAGTGATGGTCTTCCCC 2487 Query 134688 GTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || || || || ||||| Sbjct 2488 GTCAACGTCTTGACAAAGATCTGCAT 2513 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | || ||||| ||||| || ||||| |||||||||||||| Sbjct 1999 CCACCACGGAGGCGGAGGACAAGGTGGAGCGTCGACTCCTTCTGAATGTTGTAGTCAGAG 2058 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | ||| ||||| || ||||| ||||| |||| |||||||| || || || Sbjct 2059 AGCGTGCGGCCGTCCTCGAGTTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGG 2118 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || || || || ||| ||||| ||| | ||| || |||||||| || Sbjct 2119 ATACCCTCCTTATCCTGGATCTTTGCCTTGACGTTGTCGATTGTATCCGACGATTCAACC 2178 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | || || || ||||| || | || || ||||| |||||||| Sbjct 2179 TCCAAGGTGATCGTCTTACCCGTGAGGGTCTTGACGAAGATTTGCAT 2225 >seq5619 Length=11060 Score = 118 bits (130), Expect = 1e-21 Identities = 290/433 (67%), Gaps = 10/433 (2%) Strand=Plus/Minus Query 8497 CGCATCATTGATGTCAATTTTTATCCCTTGGAAGAAGCGCG-CGTATCGAACATGCGCCA 8555 |||||||| || ||||| ||||| | || ||||| ||| || ||||||||||| Sbjct 2331 CGCATCATCGACGTCAACCACTATCCTATTCCGGAGGCGCGTCGT-TCCAACATGCGCCA 2273 Query 8556 CAGACCCGTTGGCGTGGGCGTGCAAGGTCTGGCCGACGCGTTTGCCATG---TTGCGCCT 8612 | | ||| | || | |||||||| ||||||||||||||||| |||| ||||| | Sbjct 2272 CCGCCCCATCGGAATCGGCGTGCAGGGTCTGGCCGACGCGTT---CATGGCCCTGCGCAT 2216 Query 8613 CCCCTACGAAAGCCAAGAAGCGCGCATGCTCAACATAAAAATAGCGGAAACGGTGTATTA 8672 || | || | || || |||| ||||||| | | || ||||| | || | Sbjct 2215 GCCGTTTGACTCGCCCGAGGCACGCAGGCTCAACCTGCAGATCTTCGAAACCATCTACCA 2156 Query 8673 CGGCGCATTAGAAGCCAGCTGTCAACTTGCCCGAGAATTGGGCACGTACGAATCGTACGC 8732 | ||| | ||||| |||||| | | || || || ||| | ||||| ||||| Sbjct 2155 TGCCGCTGTTGAAGCGAGCTGTGAGATGGCGAAGGAGTTTGGCCCTTACGAGACGTACCA 2096 Query 8733 GGGCAGCCCTGCCAGCCGCGGAATATTGCAATACGACATGTGGAATGTCACGCCCACCTC 8792 ||||||||| || | || | | ||||| ||| | ||| |||| |||||| Sbjct 2095 GGGCAGCCCAGCGTCCGAGGGCAAGCTCCAATATGACCTATGGGGGATCACTCCCACCGA 2036 Query 8793 TTTGTGGAATTGGAGCGATTTGAAACGCAAA-ATTGCTCAATTCGGTTTGCGCAATTCGC 8851 | | ||| | ||| |||| | || ||||| | || || | |||| | || || || | Sbjct 2035 TCTATGGGACTGG-GCGAGCTTGAAGGCAAAGGTCGCACAGTACGGTCTTCGGAACTCCC 1977 Query 8852 TGTTGGTGGCTTACATGCCCACCGCCACGACTGCTCAAATAATGGGAAACAACGAATCCT 8911 || | || ||| ||||| |||||| |||| ||| || | || |||||||||| || Sbjct 1976 TGCTTGTCGCTCCGATGCCTACCGCCTCGACGAGTCAGATCCTCGGCAACAACGAATGCT 1917 Query 8912 TTGAGCCGTTCAC 8924 | ||||| | ||| Sbjct 1916 TCGAGCCCTACAC 1904 >seq7597 Length=53330 Score = 114 bits (126), Expect = 1e-20 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 134508 AGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGC 134567 ||||| || ||||| ||||| || |||||||| ||| | ||| | || || ||| Sbjct 51764 AGGTGGAGAGTGGACTCCTTCTGGATGTTGTAATCGGACAAGGTCCGCCCATCCTCAAGC 51705 Query 134568 TGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATT 134627 || ||||| || || ||||| ||||||||||| || || ||||| || || || ||||| Sbjct 51704 TGCTTGCCAGCGAAGATCAAGCGCTGCTGATCAGGGGGAATGCCCTCCTTGTCCTGAATC 51645 Query 134628 TTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCG 134687 || || || ||| | || ||||| ||||| || || ||||| || || || ||| Sbjct 51644 TTCGCCTTTACGTTGTCGATGGTATCGGAGGATTCGACCTCAAGAGTGATAGTCTTGCCG 51585 Query 134688 GTTAAAGTTTTAACGAAAATTTGCAT 134713 || | ||||| ||||| || ||||| Sbjct 51584 GTAAGCGTTTTCACGAAGATCTGCAT 51559 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | || || || || || || ||||| || ||||||||||| Sbjct 51557 CCGCCACGGAGACGGAGGACAAGATGGAGGGTAGACTCCTTCTGGATGTTGTAGTCTGAG 51498 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | ||| || ||||| ||||| || || || | ||| ||||| ||||| || Sbjct 51497 AGGGTGCGTCCGTCCTCCAGCTGCTTGCCGGCGAAGATAAGACGTTGCTGGTCGGGAGGG 51438 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || || ||||| || ||||| ||| | ||||| ||||| || || Sbjct 51437 ATACCCTCCTTGTCCTGAATCTTCGCCTTGACGTTGTCAATGGTGTCTGACGACTCAACC 51378 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || || || || || | || || |||||||| ||||| Sbjct 51377 TCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCAT 51331 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 134484 TTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCG 134543 || || || | ||| |||| ||||| || || ||||| ||||| || |||||||||||| Sbjct 52297 TTGCCGCCACGGAGACGCAGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCG 52238 Query 134544 CCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGC 134603 | || | ||| || | ||| || || || || || | ||||||||||| || Sbjct 52237 GAGAGCGTACGCCCGTCCTCCAACTGCTTCCCCGCGAAGATGAGGCGCTGCTGATCCGGA 52178 Query 134604 GGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCC 134663 || ||||| || || || || || || ||||| ||| | |||||||| || || Sbjct 52177 GGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTGTCGATCGTGTCGGAAGACTCG 52118 Query 134664 ACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || | |||||||| || || || | || || || || || ||||| Sbjct 52117 ACCTCCAACGTAATGGTCTTTCCCGTAAGGGTCTTGACAAAGATCTGCAT 52068 >seq2399 Length=624 Score = 91.5 bits (100), Expect = 1e-13 Identities = 88/113 (78%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || | ||||||||| || ||||| ||||| || ||||||||||||| | |||| | Sbjct 433 AGACGAAGCACGAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGG 374 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTAT 134608 ||| |||||||| ||||| || || |||| |||||||| ||||| || || Sbjct 373 CCGTCCTCGAGCTGCTTGCCCGCGAAGATCAGGCGCTGCTGGTCGGGGGGAAT 321 >seq6239 Length=75403 Score = 84.2 bits (92), Expect = 2e-11 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || ||||| || || || ||||| || ||||||||||||| | |||| | || || Sbjct 57491 ACAAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGGCCATCCTCA 57550 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGC 134610 ||||| ||||| ||||| |||| ||||||||| ||||| || |||| Sbjct 57551 AGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCGGGGGGAATGC 57596 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505337448952960