Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000787515.1_202014-11-26]
9,648 sequences; 31,621,284 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq7597 129 1e-24
seq1153 116 9e-21
>seq7597
Length=53330
Score = 129 bits (142), Expect = 1e-24
Identities = 160/219 (73%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | |||||||||||| || |||||||| || ||||||||||| || | | || |
Sbjct 51549 GAGACGGAGGACAAGATGGAGGGTAGACTCCTTCTGGATGTTGTAGTCTGAGAGGGTGCG 51490
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
|| || || || || |||||||||||||| | |||||||| | | ||| || ||
Sbjct 51489 TCCGTCCTCCAGCTGCTTGCCGGCGAAGATAAGACGTTGCTGGTCGGGAGGGATACCCTC 51430
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065
||| || ||||| || ||||| | || | | ||||||| ||| || ||||| ||
Sbjct 51429 CTTGTCCTGAATCTTCGCCTTGACGTTGTCAATGGTGTCTGACGACTCAACCTCAAGGGT 51370
Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || |||||||| ||||| ||||| | ||||||
Sbjct 51369 GATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCAT 51331
Score = 109 bits (120), Expect = 1e-18
Identities = 149/208 (72%), Gaps = 0/208 (0%)
Strand=Plus/Minus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || ||||| ||||| || |||||||||||||||| || || | |||||| || |
Sbjct 51766 CAAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAATCGGACAAGGTCCGCCCATCCTCAA 51707
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
| || || |||||||| | | |||||| || | | || || ||||| || ||||
Sbjct 51706 GCTGCTTGCCAGCGAAGATCAAGCGCTGCTGATCAGGGGGAATGCCCTCCTTGTCCTGAA 51647
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| || || || | || | | | || || || || |||||||| ||||| ||||
Sbjct 51646 TCTTCGCCTTTACGTTGTCGATGGTATCGGAGGATTCGACCTCAAGAGTGATAGTCTTGC 51587
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104
| || || || |||||||||| ||||||
Sbjct 51586 CGGTAAGCGTTTTCACGAAGATCTGCAT 51559
Score = 107 bits (118), Expect = 4e-18
Identities = 154/215 (72%), Gaps = 4/215 (2%)
Strand=Plus/Minus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
|||||| | ||||| || ||||| || |||||||||||||| | || || | || ||
Sbjct 52052 GAGGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGACAAGGTACGGCCGTC 51993
Query 151952 TTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTT 152009
|| || ||||| || ||||||||||| | ||||||||| | | ||| || |||||
Sbjct 51992 CTCCAGCTGCTTT--CCAGCGAAGATAAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTG 51935
Query 152010 TCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATA 152069
||||| || || || || | || | | | || || ||| || ||||| || ||
Sbjct 51934 TCTTGGATCTTCGCCTTCACGTTATCGATGGTATCCGACGACTCGACCTCAAGCGTGATG 51875
Query 152070 GTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| ||||| || | ||||||||||||| |||||
Sbjct 51874 GTCTTGCCAGTCAACGTCTTCACGAAGATTTGCAT 51840
Score = 104 bits (114), Expect = 5e-17
Identities = 150/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
||||| ||||| || || ||||| || ||||||||||| |||| | || | ||| ||
Sbjct 52279 AGGACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGCGTACGCCCGTCC 52220
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| | ||||| |||||||| || | |||||| |||| | ||| || ||||| ||
Sbjct 52219 TCCAACTGCTTCCCCGCGAAGATGAGGCGCTGCTGATCCGGAGGGATGCCCTCCTTGTCC 52160
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
|| || || ||||| | || | |||| ||| ||| || || | ||||| ||
Sbjct 52159 TGGATCTTCGCCTTGACGTTGTCGATCGTGTCGGAAGACTCGACCTCCAACGTAATGGTC 52100
Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| ||||| || ||||| || |||| ||||||
Sbjct 52099 TTTCCCGTAAGGGTCTTGACAAAGATCTGCAT 52068
>seq1153
Length=45894
Score = 116 bits (128), Expect = 9e-21
Identities = 153/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
||||| || ||||| || ||||| || ||||||||||| || | | || | |||||
Sbjct 1786 AGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGCGTGCGGCCATCC 1845
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || ||||||||||| || | ||||||||| | || ||| || ||||| ||
Sbjct 1846 TCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGCGGGATACCCTCCTTGTCC 1905
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
|| || || || ||| | || | | |||| || ||| || || ||||| || ||
Sbjct 1906 TGGATCTTCGCCTTCACATTGTCGATGGTGTCCGACGACTCGACCTCGAGAGTGATGGTC 1965
Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||||| || |||||||| ||||||| |||||
Sbjct 1966 TTGCCGGTCAGAGTCTTAACGAAGATTTGCAT 1997
Score = 100 bits (110), Expect = 7e-16
Identities = 147/208 (71%), Gaps = 0/208 (0%)
Strand=Plus/Plus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| ||||| || ||| || ||||||||||| |||| || || | ||||| || |
Sbjct 2306 CAAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGACAAGGTGCGACCATCCTCAA 2365
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
| || || |||||||| || | ||||||||| | || ||| || ||||| || ||||
Sbjct 2366 GCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGAA 2425
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| || || || | || | |||| ||| ||| || || ||||| || || || |
Sbjct 2426 TCTTCGCCTTCACGTTGTCGATCGTGTCGGAAGACTCGACCTCGAGAGTGATGGTCTTCC 2485
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|||| | ||||| || |||| ||||||
Sbjct 2486 CCGTCAACGTCTTGACAAAGATCTGCAT 2513
Score = 84.2 bits (92), Expect = 5e-11
Identities = 150/219 (68%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | ||||||||| || || || ||||| || || |||||||| || | | || |
Sbjct 2007 GAGGCGGAGGACAAGGTGGAGCGTCGACTCCTTCTGAATGTTGTAGTCAGAGAGCGTGCG 2066
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
|| || || || || || || ||||| || | ||||||||||| | ||| || ||
Sbjct 2067 GCCGTCCTCGAGTTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGGATACCCTC 2126
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065
||| || || || ||| ||||| | || | | || || || || || | ||
Sbjct 2127 CTTATCCTGGATCTTTGCCTTGACGTTGTCGATTGTATCCGACGATTCAACCTCCAAGGT 2186
Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|| || || |||||||| ||||| ||||||| |||||
Sbjct 2187 GATCGTCTTACCCGTGAGGGTCTTGACGAAGATTTGCAT 2225
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153678170441808
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |