Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20cinnabarina_20[genbank_20GCA_5F000787515.1_202014-11-26] 9,648 sequences; 31,621,284 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq7597 149 5e-31 seq1153 141 7e-29 >seq7597 Length=53330 Score = 149 bits (164), Expect = 5e-31 Identities = 159/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || || || || ||| |||||| ||||||||||| |||| ||| ||| |||| ||| Sbjct 52276 ACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGCGTACGCCCGTCCTCC 52217 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 | ||||||||| || ||||| | ||||||||||| | ||| | || ||||| ||| Sbjct 52216 AACTGCTTCCCCGCGAAGATGAGGCGCTGCTGATCCGGAGGGATGCCCTCCTTGTCCTGG 52157 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 |||||| ||| | | | || ||||||| || || ||||||| |||||| |||||| Sbjct 52156 ATCTTCGCCTTGACGTTGTCGATCGTGTCGGAAGACTCGACCTCCAACGTAATGGTCTTT 52097 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 ||||| |||||||| || ||||| |||||| Sbjct 52096 CCCGTAAGGGTCTTGACAAAGATCTGCATG 52067 Score = 136 bits (150), Expect = 3e-27 Identities = 146/193 (76%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 |||||| ||||||||||| || | ||| ||| |||| ||||||||||| ||||| || Sbjct 51522 CTCCTTCTGGATGTTGTAGTCTGAGAGGGTGCGTCCGTCCTCCAGCTGCTTGCCGGCGAA 51463 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265 ||| | ||| ||||| || | ||| | ||| ||||| ||| |||||| ||| | | Sbjct 51462 GATAAGACGTTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGAATCTTCGCCTTGACGTT 51403 Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | |||||||| | || || ||||| | || |||||||| |||||||||||||| || Sbjct 51402 GTCAATGGTGTCTGACGACTCAACCTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGAC 51343 Query 44326 GAAGATTTGCATG 44338 ||| || |||||| Sbjct 51342 GAAAATCTGCATG 51330 Score = 132 bits (146), Expect = 3e-26 Identities = 159/212 (75%), Gaps = 3/212 (1%) Strand=Plus/Minus Query 44128 CACCA-GGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-CGAGTTGGCGCTCGTCG 44185 ||||| |||| || ||| |||||| |||||||||||||||| | || | ||| | || Sbjct 51769 CACCAAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAATCGGACAAGGTC-CGCCCATCC 51711 Query 44186 TCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCC 44245 || |||||||| || || |||||||| ||||||||||| | || | || ||||| ||| Sbjct 51710 TCAAGCTGCTTGCCAGCGAAGATCAAGCGCTGCTGATCAGGGGGAATGCCCTCCTTGTCC 51651 Query 44246 GTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305 |||||| ||| | | | ||||| |||| |||||| ||||| | || || ||| Sbjct 51650 TGAATCTTCGCCTTTACGTTGTCGATGGTATCGGAGGATTCGACCTCAAGAGTGATAGTC 51591 Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || || || ||||||||||| ||||| Sbjct 51590 TTGCCGGTAAGCGTTTTCACGAAGATCTGCAT 51559 Score = 125 bits (138), Expect = 5e-24 Identities = 156/211 (74%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-CGAGTTGGCGCTCGTCGTC 44187 |||| |||||| || |||||| |||||||||||||| | | || | || |||| || Sbjct 52048 ACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGACAAGGTACGGC-CGTCCTC 51990 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247 ||||||||| || || ||||| | ||||||||| || | ||| | || ||||| || Sbjct 51989 CAGCTGCTTTCCAGCGAAGATAAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCTTG 51930 Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 |||||| ||||| | | ||||| || | || || ||||| | ||| || ||||| Sbjct 51929 GATCTTCGCCTTCACGTTATCGATGGTATCCGACGACTCGACCTCAAGCGTGATGGTCTT 51870 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || || | ||||||||||||||||||||| Sbjct 51869 GCCAGTCAACGTCTTCACGAAGATTTGCATG 51839 >seq1153 Length=45894 Score = 141 bits (156), Expect = 7e-29 Identities = 159/210 (76%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||| ||||| |||||| || |||||||| || | ||| ||| |||| || Sbjct 2017 ACAAGGTGGAGCGTCGACTCCTTCTGAATGTTGTAGTCAGAGAGCGTGCGGCCGTCCTCG 2076 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || ||||| || |||||||||| |||||||| || | ||| | ||| ||||| ||| Sbjct 2077 AGTTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGAGGGATACCCTCCTTATCCTGG 2136 Query 44249 ATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||| | | ||| | || || || | ||||| ||||||| || |||||||| Sbjct 2137 ATCTT-TGCCTTGACGTTGTCGATTGTATCCGACGATTCAACCTCCAAGGTGATCGTCTT 2195 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||||||||||| |||||||||||||| Sbjct 2196 ACCCGTGAGGGTCTTGACGAAGATTTGCAT 2225 Score = 131 bits (144), Expect = 1e-25 Identities = 159/213 (75%), Gaps = 3/213 (1%) Strand=Plus/Plus Query 44128 CACCA-GGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG-CGAGTTGGCGCTCGTCG 44185 ||||| ||||||| ||||||||||| ||||||||||| |||| | || | ||| | || Sbjct 2303 CACCAAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGACAAGGT-GCGACCATCC 2361 Query 44186 TCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCC 44245 || |||||||| || || ||||||| ||||||||| || | || | || ||||| ||| Sbjct 2362 TCAAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCC 2421 Query 44246 GTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTC 44305 |||||| ||||| | | || ||||||| || || ||||| | || || ||| Sbjct 2422 TGAATCTTCGCCTTCACGTTGTCGATCGTGTCGGAAGACTCGACCTCGAGAGTGATGGTC 2481 Query 44306 TTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || ||||| | ||||| || ||||| |||||| Sbjct 2482 TTCCCCGTCAACGTCTTGACAAAGATCTGCATG 2514 Score = 120 bits (132), Expect = 2e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || |||||||| || |||||| ||||||||||| || | || ||| | || || Sbjct 1789 ACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGCGTGCGGCCATCCTCG 1848 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||| ||||| | |||||||| || | || | ||| ||||| ||| Sbjct 1849 AGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGCGGGATACCCTCCTTGTCCTGG 1908 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 |||||| ||||| | | |||||||| | || || ||||| | || || ||||| Sbjct 1909 ATCTTCGCCTTCACATTGTCGATGGTGTCCGACGACTCGACCTCGAGAGTGATGGTCTTG 1968 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || || ||||| |||||||||||||| Sbjct 1969 CCGGTCAGAGTCTTAACGAAGATTTGCAT 1997 Score = 120 bits (132), Expect = 2e-22 Identities = 150/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 44132 AGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGC 44191 ||||| || ||||||||||| || ||||| ||||||| ||| || | || ||||| Sbjct 2587 AGGTGGAGAGTGCTCTCCTTCTGAATGTTATAATCGGAGAGGGTACGACCATCCTCCAGT 2646 Query 44192 TGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATC 44251 ||||| || |||||||| | ||||||||| || | ||| | ||| ||||| ||| ||| Sbjct 2647 TGCTTGCCAGCAAAGATGAGACGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTGGATC 2706 Query 44252 TTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCC 44311 || ||||| | | |||||||| | || || ||||| | || || ||||| || Sbjct 2707 TTAGCCTTCACATTGTCGATGGTGTCCGACGACTCGACCTCGAGGGTGATGGTCTTGCCG 2766 Query 44312 GTGAGGGTCTTCACGAAGATTTGCAT 44337 || | ||||| || ||||| ||||| Sbjct 2767 GTCAAAGTCTTGACAAAGATCTGCAT 2792 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359948070528816