Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20hirsuta_20[genbank_20GCA_5F001302255.2_202017-02-03] 13 sequences; 37,433,966 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq6 425 6e-114 seq1 143 3e-29 seq9 132 5e-26 seq12 100 3e-16 >seq6 Length=3889359 Score = 425 bits (470), Expect = 6e-114 Identities = 487/653 (75%), Gaps = 9/653 (1%) Strand=Plus/Minus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||||||||| || |||||||||| ||||| |||||||| Sbjct 952792 ATCTGGCAAATGTACAAGAAGGCCGAGGCATCCTTCTGGACCGCTGAGGAAATGGACCTG 952733 Query 116696 TCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 |||||||| | |||||| | ||| | ||| || | || ||||| |||||| | Sbjct 952732 TCCAAGGATCTGCATGACTGGAACAACCGCCTCAACAACGATGAACGCCACTTCATCTCG 952673 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 ||||| ||||| || ||||||||| |||||| |||||||||||||| ||||| |||||| Sbjct 952672 CACGTTCTGGCGTTCTTCGCCGCCTCCGACGGTATCGTCAACGAGAACCTGGTAGAGCGT 952613 Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872 ||| | | ||||| |||| |||||||||||| |||||||||||||| |||||| ||| Sbjct 952612 TTCTCCAACGAGGTCCAGGCGGCCGAGGCGCGCTGCTTCTACGGCTTCCAGATCATGATG 952553 Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTA---CGTGCGCTCTTCG 116929 |||||| | ||||| || | ||| ||| ||||||||||||||| | | | | | Sbjct 952552 GAGAACATTCACTCTGAGACGTACTCGCTCCTCATCGACACGTATATCAAGGACCCCGCA 952493 Query 116930 GAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCC 116989 || ||| || | || | ||||||||||| || || ||| | || ||||||| Sbjct 952492 CAGCGCGAGCACC---TCTTCGATGCCATCGAGACTATCCCCTGCATTAAGAAGAAGGCT 952436 Query 116990 GAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCC 117049 || ||||| || ||||||||| | | || ||| | ||||||| || ||||| || ||| Sbjct 952435 GATTGGGCTCTTCGCTGGATCTCGGACAAGGAGTCAGCCTTCGCTGAACGCCTTGTAGCC 952376 Query 117050 TTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAG 117109 ||||| ||||||||||| |||| || || ||| ||||||| |||| || ||||||||| Sbjct 952375 TTCGCTGCCGTCGAGGGTATCTTTTTCTCTGGCTCTTTCGCCTCCATCTTCTGGCTCAAG 952316 Query 117110 AAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGT 117169 || |||||| | ||||| ||||| || ||| ||||||||||||||| | || ||||| Sbjct 952315 AAGCGCGGCTTGATGCCTGGCCTCACCTTCTCTAACGAGCTCATCTCCCGCGATGAGGGC 952256 Query 117170 CTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGGCG 117229 |||| |||||| ||||| ||||| |||| || || | ||| ||| | | | | Sbjct 952255 ATGCACACCGACTTCGCCTGCTTGCTCTTCAGCCACATGAAGAGGCGGCCGCACCCCGAG 952196 Query 117230 CGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCAC 117282 |||| | |||| | | ||| || |||| || |||||| |||||||| Sbjct 952195 ATCGTCCGTCAGATTATTATCGAGGCCGTCGAGATTGAGCAGGAGTTCCTCAC 952143 Score = 378 bits (418), Expect = 7e-100 Identities = 482/654 (74%), Gaps = 11/654 (2%) Strand=Plus/Plus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| | ||| | || || |||||||||||||| ||| | ||||| Sbjct 954258 ATATGGCAGATGTACAAGGACGCCCAAGCATCCTTCTGGACCGTCGAAGAGATCGACCTC 954317 Query 116696 TCCAAGGACACGAGCGACTGG--GAGC--GCTTGAACGACAACGAGCGCCATTTCATCAA 116751 ||| | ||| | |||||| || | ||| | | |||||||| || ||| || Sbjct 954318 TCCTACGACCTCATGGACTGGACGACCAAGCTC-ACCCCCAACGAGCAGCACTTCGTCTC 954376 Query 116752 GCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCG 116811 |||| || ||||| ||||||||| ||||| |||||||||||||| || |||||||| Sbjct 954377 CTACGTCCTCGCCTTCTTCGCCGCCTCGGACGGGATCGTCAACGAGAACCTCGTCGAGCG 954436 Query 116812 TTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871 ||| | | || ||||||| ||||||||||| |||||||||||||| |||||| || Sbjct 954437 GTTCTCCAACGAAGTGCAGGCCGCCGAGGCGCGCTGCTTCTACGGCTTCCAGATCATGAT 954496 Query 116872 GGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGA 116931 ||||||||||||||||| | ||| ||| |||||||||||||||||| ||| | | Sbjct 954497 CGAGAACGTGCACTCGGAGACGTACTCGCTCCTCATCGACACGTACGTCCGCGACCCCGC 954556 Query 116932 GGAGAAGCTCCGTT--TGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCC 116989 | || || | ||| |||| |||| ||| | || || || |||||| |||||| Sbjct 954557 GCAGC-GCGC-GTTCCTGTTCGACGCGATCAACACCATCCCCTGCGTCGCGCGCAAGGCC 954614 Query 116990 GAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCC 117049 || ||||| |||||||||||||||| | ||| ||||| |||||||| || || Sbjct 954615 GACTGGGCCCTGCGCTGGATCGCCGACTCGCGCTCCGTCTTCGCAGAGCGCCTCGTCGCG 954674 Query 117050 TTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAG 117109 ||||| |||||||||||||||||||| || || |||||||| || || ||||||||| Sbjct 954675 TTCGCCGCCGTCGAGGGCGTCTTCTTCTCCGGGTCCTTCGCCGCGATCTTCTGGCTCAAG 954734 Query 117110 AAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGT 117169 || |||||| | ||||| || || || ||| |||||||||||||||| | || ||||| Sbjct 954735 AAGCGCGGCTTGATGCCTGGTCTCACGTTCTCCAACGAGCTCATCTCCCGCGATGAGGGC 954794 Query 117170 CTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCG-AGCGCGGC 117228 |||| ||||||||| || |||||||| | || || | ||| ||| | | | | Sbjct 954795 ATGCACACCGACTTTGCGTGCCTGCTGTTCCACCACCTGCGCCGGCGGCCGCATCCCAG- 954853 Query 117229 GCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCAC 117282 ||| || | | ||| || |||| || || | |||||| || |||||||| Sbjct 954854 GCGTGTGCTGAAAATCATCTCCGAGGCTGTGGAGATCGAGAAGGAGTTCCTCAC 954907 >seq1 Length=4437623 Score = 143 bits (158), Expect = 3e-29 Identities = 163/216 (75%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || ||||||||||| || |||||| |||| || || | | Sbjct 1911108 ATGCAGATCTTTGTCAAGACCCTCACGGGCAAGACGATCACCCTCGAGGTTGAGTCTTCG 1911167 Query 40750 GACAGCGT-GCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| |||||| ||| || | ||||| ||||| ||||| ||||||| Sbjct 1911168 GACACCATCGATAACG-TCAAGGCAAAGATCCAAGACAAGGAGGGTATCCCGCCGGACCA 1911226 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||||| ||||||| ||||||||| ||||| || || | || || || ||| ||||| Sbjct 1911227 GCAACGCCTCATCTTCGCGGGCAAGCAGCTTGAGGATGGCCGTACTCTTTCCGATTACAA 1911286 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCG 40904 ||||||||||||| | || || || || || |||| Sbjct 1911287 CATCCAGAAGGAGTCTACTCTTCACCTTGTTCTGCG 1911322 Score = 123 bits (136), Expect = 3e-23 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || |||||||| || ||||| ||||| | || ||||| | || Sbjct 1911844 ATGCAGATCTTCGTTAAGACGCTCACCGGGAAAACAATCACATTGGAGGTCGAGTCTTCC 1911903 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | | | |||| || || | ||||| |||||||| ||| |||||||| Sbjct 1911904 GATACGATCGACAATGTGAAGGCGAAGATACAGGACAAGGAGGGCATTCCCCCGGACCAG 1911963 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || ||||||| ||| || || ||| |||| |||| || || || ||||||||| Sbjct 1911964 CAGCGCCTCATCTTCGCTGGGAAGCAGTTGGAGGACGGCCGTACGCTGTCTGACTACAAC 1912023 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCT 40895 |||||||||||| ||| ||||| || Sbjct 1912024 ATCCAGAAGGAGAGCACTCTGCACCT 1912049 Score = 118 bits (130), Expect = 1e-21 Identities = 150/204 (74%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || | |||||||| || ||||| | || ||||| || | Sbjct 1911616 ATGCAGATCTTCGTGAAGACTTTGACGGGCAAGACTATCACTCTGGAAGTCGAGTCCTCA 1911675 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | |||| |||||| || || | || || || |||||||| | ||||| Sbjct 1911676 GACACGATCGACAACG-TCAAGGCGAAGATCCAGGATAAGGAAGGCATCCCGCCCGACCA 1911734 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||||| | |||| ||||| |||||||| || |||| ||||| || ||||||||| Sbjct 1911735 GCAACGGTTGATCTTTGCGGGAAAACAGCTTGAGGACGGTCGCACTCTGTCCGACTACAA 1911794 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||||||| | || || || Sbjct 1911795 CATCCAGAAGGAGTCAACCCTTCA 1911818 Score = 102 bits (112), Expect = 8e-17 Identities = 146/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || | || || || || ||||| |||| || || || | Sbjct 1911336 ATGCAAATCTTCGTCAAGACATTGACCGGAAAGACGATCACGCTCGAGGTTGAGTCCTCT 1911395 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | |||||| || || | ||||| ||||| ||||| ||||||| Sbjct 1911396 GACACTATTGACAATGTCAAGGCGAAGATCCAAGACAAGGAGGGTATCCCGCCGGACCAA 1911455 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || ||||||| || ||||| ||||| || |||| || || | ||||||||| Sbjct 1911456 CAGCGTCTCATCTTTGCTGGCAAGCAGCTTGAAGACGGTCGGACGTTGTCGGACTACAAC 1911515 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCT 40895 || |||||||| | || |||||||| Sbjct 1911516 ATTCAGAAGGAATCTACCCTGCATCT 1911541 Score = 102 bits (112), Expect = 8e-17 Identities = 86/106 (81%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 40793 GCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCA 40852 |||||||| | |||||||| || || |||| ||| ||||| ||||| || |||| |||| Sbjct 3825004 GCATCCCCCCCGACCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCA 3824945 Query 40853 CCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 | |||| |||||||||||||||||||||| | || || || || || Sbjct 3824944 CGCTCAGCGACTACAACATCCAGAAGGAGTCTACTCTCCACCTTGT 3824899 Score = 84.2 bits (92), Expect = 2e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 40795 ATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACC 40854 ||||| | |||||||| || || |||| ||||||||| ||||| || || | || ||| Sbjct 1910985 ATCCCTCCCGACCAGCAGCGCCTGATCTTCGCGGGCAAGCAGCTCGAGGATGGCCGGACC 1911044 Query 40855 CTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 || |||||||||||||||||||| | |||||||| || || Sbjct 1911045 CTGTCGGACTACAACATCCAGAAGGAATCTACGCTGCACCTCGT 1911088 >seq9 Length=3088601 Score = 132 bits (146), Expect = 5e-26 Identities = 153/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || | || ||||| |||||||| |||| ||||| | || Sbjct 2856758 ATGCAGATCTTTGTGAAGACCTTGACCGGCAAGACCATCACGCTCGAGGTCGAGTCTTCC 2856699 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||||| || |||| ||||| |||||||| ||| |||| || Sbjct 2856698 GACACCATCGACAATGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCGGATCAA 2856639 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| || ||||| ||| |||| |||| ||||||||| |||||||||| Sbjct 2856638 CAGCGTCTTATCTTTGCTGGCAAGCAGTTGGAGGACGGTCGCACCCTCTCCGACTACAAC 2856579 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCT 40895 |||||||||||| ||| || || || Sbjct 2856578 ATCCAGAAGGAGAGCACCCTCCACCT 2856553 Score = 111 bits (122), Expect = 2e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || |||||||| || || || || | || |||||| | | Sbjct 2856477 ATGCAGATCTTCGTCAAGACCCTCACGGGTAAGACGATTACTCTGGAGGTCGAATCATCG 2856418 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | |||||| || |||| ||||| || || || || | |||||| Sbjct 2856417 GACACGATCGACAATGTCAAGGCGAAGATTCAGGACAAGGAAGGTATTCCTCCCGACCAG 2856358 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| || ||||| ||||| || |||| || || ||| ||||||||| Sbjct 2856357 CAGCGCCTGATCTTTGCCGGCAAGCAGCTCGAAGACGGTCGTACTCTCTCGGACTACAAC 2856298 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||||||| | || ||||| || || Sbjct 2856297 ATCCAGAAGGAGTCGACTCTGCACCTTGT 2856269 Score = 105 bits (116), Expect = 7e-18 Identities = 152/212 (72%), Gaps = 2/212 (1%) Strand=Plus/Minus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || || || || || || || || || ||||||||| | || || || | | Sbjct 2856250 AATGCAGATCTTTGTCAAGACCCTGACCGGGAAGACCATCACCCTGGAGGTTGAGTCGTC 2856191 Query 40749 CGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807 |||| | | |||| | |||| || || | ||||| ||||| || || | |||| Sbjct 2856190 GGACACGATCGACAACG-TGAAGGCCAAGATCCAGGACAAGGAGGGGATTCCGCCCGACC 2856132 Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867 |||| || ||||| | ||| ||||| ||||| || || | ||||| ||| || |||| Sbjct 2856131 AGCAGCGCCTCATTTTCGCCGGCAAGCAGCTCGAGGATGGTCGCACGCTCTCGGATTACA 2856072 Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 |||||||||||||| ||| ||||| || ||| Sbjct 2856071 ACATCCAGAAGGAGAGCACCCTGCACCTTGTG 2856040 Score = 96.9 bits (106), Expect = 4e-15 Identities = 83/103 (81%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 40793 GCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCA 40852 |||| ||| | ||||||||||| ||||||| || || || ||||| || |||| ||||| Sbjct 2856939 GCATTCCCCCTGACCAGCAACGTCTCATCTTTGCCGGGAAGCAGCTTGAGGACGGGCGCA 2856880 Query 40853 CCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCT 40895 |||| ||||||||||||||||||||| |||| |||| || Sbjct 2856879 CCCTTTCGGACTACAACATCCAGAAGGAGTCCACCTTGCACCT 2856837 >seq12 Length=2614590 Score = 100 bits (110), Expect = 3e-16 Identities = 90/113 (80%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 40793 GCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCA 40852 |||| ||| | |||||||| || || || | ||||||||| ||||| || || | || | Sbjct 1420303 GCATTCCCCCCGACCAGCAGCGCCTGATTTTCGCGGGCAAGCAGCTCGAGGATGGCCGTA 1420362 Query 40853 CCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGC 40905 |||||| |||||||||||||||||||||| |||| || || || ||| | ||| Sbjct 1420363 CCCTCAGCGACTACAACATCCAGAAGGAGTCCACCCTCCACCTGGTGCTCCGC 1420415 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515219116276880