Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20hirsuta_20[genbank_20GCA_5F001302255.2_202017-02-03] 13 sequences; 37,433,966 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq13 105 6e-18 >seq13 Length=2611572 Score = 105 bits (116), Expect = 6e-18 Identities = 167/237 (70%), Gaps = 2/237 (1%) Strand=Plus/Minus Query 21237 AGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGTACTCCGCCCCAAAA 21296 |||||||| || |||| || ||||| ||||||| || ||||| ||| ||||| Sbjct 30846 AGCTGGTCGACGCCCTTGCCGGAGTAGTCGGCGTCGCAGTCCTCGTACTGCGCGCCAAAG 30787 Query 21297 TGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGCCCTCGCGGCGGTCCCCGAAGCCC 21356 || | ||||||||| || || || || || || |||||||||||||||| |||| ||| Sbjct 30786 TGCCGCCACTGGAAACCATAGACGGGGCCGAGGTCGCCCTCGCGGCGGTGTCCGAGGCCG 30727 Query 21357 TGCGCCGCCAAAAAGGCGCGGGACCCGTGCGCGTCCCAAATTTTTACGCC-GCGGCGCGA 21415 || | | ||| | ||| |||| | ||||||| || || ||||| |||| || Sbjct 30726 CGCTTTTCAAGGAAGTCTTTGGAGCCGTTCCCGTCCCAGATCTTGACGCCTTTGGCG-GA 30668 Query 21416 CAGTTCGGTGGAGTCGGTGGAGCCCCTGATAAACCACAGCAACTCCTCCACGACGCC 21472 || | ||||||| ||| |||| | |||||| | | |||||| |||| ||| Sbjct 30667 GAGCTGTTTGGAGTCCGTGCAGCCGTGCACAAACCAGATGAGCTCCTCGACGATGCC 30611 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427775932224240