Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20hirsuta_20[genbank_20GCA_5F001302255.2_202017-02-03] 13 sequences; 37,433,966 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq13 107 1e-18 >seq13 Length=2611572 Score = 107 bits (118), Expect = 1e-18 Identities = 206/299 (69%), Gaps = 10/299 (3%) Strand=Plus/Minus Query 25669 GGGTTCCAGGCGCACACGATGATGCACCTGTCTTCTGGGTTGTCCCTGATAAGATCCGCG 25728 |||||||| |||| | |||||||| | |||| |||| || | |||| | ||| Sbjct 30915 GGGTTCCATGCGCTGAGGATGATGCGACGGTCTGTAGGGTCGTGCTTGAT----TTTGCG 30860 Query 25729 G-TG---TTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCC-CTCATGTCCGTGT 25783 || | || ||||| || || ||| | || |||||||| || | || |||| || Sbjct 30859 AATGCACTCCTGGAGCTGGTCGACGCCCTTGCCGGAGTAGTCGGCGTCGCA-GTCCTCGT 30801 Query 25784 ACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTCTCCATCTTCCC 25843 ||| || || || | || ||||||||| || || || || || ||||| || || | Sbjct 30800 ACTGCGCGCCAAAGTGCCGCCACTGGAAACCATAGACGGGGCCGAGGTCGCCCTCGCGGC 30741 Query 25844 TGTGCTCAAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTCCCAGATCTTTA 25903 ||| | | ||| | ||| || | |||||| |||| || || ||||||||||||| | Sbjct 30740 GGTGTCCGAGGCCGCGCTTTTCAAGGAAGTCTTTGGAGCCGTTCCCGTCCCAGATCTTGA 30681 Query 25904 CCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCC 25962 | || || ||||||||| |||||||| ||| | || || ||||| | |||||| Sbjct 30680 CGCCTTTGGCGGAGAGCTGTTTGGAGTCCGTGCAGCCGTGCACAAACCAGATGAGCTCC 30622 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340137546109449