Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trametes_20hirsuta_20[genbank_20GCA_5F001302255.2_202017-02-03]
13 sequences; 37,433,966 total letters
Query= NC_005832.1
Length=106332
Score E
Sequences producing significant alignments: (Bits) Value
seq13 107 1e-18
>seq13
Length=2611572
Score = 107 bits (118), Expect = 1e-18
Identities = 206/299 (69%), Gaps = 10/299 (3%)
Strand=Plus/Minus
Query 25669 GGGTTCCAGGCGCACACGATGATGCACCTGTCTTCTGGGTTGTCCCTGATAAGATCCGCG 25728
|||||||| |||| | |||||||| | |||| |||| || | |||| | |||
Sbjct 30915 GGGTTCCATGCGCTGAGGATGATGCGACGGTCTGTAGGGTCGTGCTTGAT----TTTGCG 30860
Query 25729 G-TG---TTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCC-CTCATGTCCGTGT 25783
|| | || ||||| || || ||| | || |||||||| || | || |||| ||
Sbjct 30859 AATGCACTCCTGGAGCTGGTCGACGCCCTTGCCGGAGTAGTCGGCGTCGCA-GTCCTCGT 30801
Query 25784 ACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTCTCCATCTTCCC 25843
||| || || || | || ||||||||| || || || || || ||||| || || |
Sbjct 30800 ACTGCGCGCCAAAGTGCCGCCACTGGAAACCATAGACGGGGCCGAGGTCGCCCTCGCGGC 30741
Query 25844 TGTGCTCAAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTCCCAGATCTTTA 25903
||| | | ||| | ||| || | |||||| |||| || || ||||||||||||| |
Sbjct 30740 GGTGTCCGAGGCCGCGCTTTTCAAGGAAGTCTTTGGAGCCGTTCCCGTCCCAGATCTTGA 30681
Query 25904 CCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCC 25962
| || || ||||||||| |||||||| ||| | || || ||||| | ||||||
Sbjct 30680 CGCCTTTGGCGGAGAGCTGTTTGGAGTCCGTGCAGCCGTGCACAAACCAGATGAGCTCC 30622
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 340137546109449
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |