Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20hirsuta_20[genbank_20GCA_5F001302255.2_202017-02-03] 13 sequences; 37,433,966 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq8 127 5e-24 >seq8 Length=3112363 Score = 127 bits (140), Expect = 5e-24 Identities = 169/232 (73%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 363736 TACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGAC 363795 |||||| ||||| ||||||||||| || | ||||| ||||| ||||||| ||| Sbjct 1724057 TACATTGCTGGCACGAACGGATACTCGAACGGAATCGTTCCTATGCTCCGTGTGTACGAC 1724116 Query 363796 AATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTAT 363855 ||||| | ||||| || ||||| || ||||| || ||||||||||| ||| Sbjct 1724117 GCCACTGCCCGTTACGTTGATCAGGGCGGCAACAAGCGTCCGGGCGCGTTTGCTATCTAT 1724176 Query 363856 CTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAA-AAACACGGGAA- 363913 || |||||| || |||||| | || ||||| ||||| || || || || |||||||| Sbjct 1724177 CTTGAGCCTTGGCACGCCGATGTCTTCGAGTTCCTTGACCTTCGCAAGAACCACGGGAAG 1724236 Query 363914 -AAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACC 363964 |||||| | || || || || |||||||||| |||||||| | |||| Sbjct 1724237 GAAGAGG---TTCGCGCCCGCGACTTGTTCTATGCCCTTTGGGTACCCGACC 1724285 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303353382910166