Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20hirsuta_20[genbank_20GCA_5F001302255.2_202017-02-03] 13 sequences; 37,433,966 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq1 114 1e-20 >seq1 Length=4437623 Score = 114 bits (126), Expect = 1e-20 Identities = 150/206 (73%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || ||||| |||||||| || | ||||| |||| || ||||| ||| Sbjct 1911336 ATGCAAATCTTCGTCAAGACATTGACCGGAAAGACGATCACGCTCGAGGTTGAGTCCTCT 1911395 Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 |||||||| || || || ||| || ||| ||||| || || || || || |||| Sbjct 1911396 GACACTATTGA--CAATGTCAAGGCGAAGATCCAAGACAAGGAGGGTATCCCGCCGGACC 1911453 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 ||||||| | || ||||| ||||| || | ||||| | ||| || || || |||| Sbjct 1911454 AACAGCGTCTCATCTTTGCTGGCAAGCAGCTTGAAGACGGTCGGACGTTGTCGGACTACA 1911513 Query 25177 ATATTCAAAAAGAATCCACGCTACAT 25202 | ||||| || ||||| || || ||| Sbjct 1911514 ACATTCAGAAGGAATCTACCCTGCAT 1911539 Score = 98.7 bits (108), Expect = 9e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||||||||| || || | ||||| | ||||| ||||| || Sbjct 1911616 ATGCAGATCTTCGTGAAGACTTTGACGGGCAAGACTATCACTCTGGAAGTCGAGTCCTCA 1911675 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| ||||| | ||| || ||| || || ||||| || || || ||||| Sbjct 1911676 GACACGATCGACAACGTCAAGGCGAAGATCCAGGATAAGGAAGGCATCCCGCCCGACCAG 1911735 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 || ||| | || ||||| || ||||| | || || | ||||||| || ||| ||||| Sbjct 1911736 CAACGGTTGATCTTTGCGGGAAAACAGCTTGAGGACGGTCGCACTCTGTCCGACTACAAC 1911795 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || || || || || || || || Sbjct 1911796 ATCCAGAAGGAGTCAACCCTTCACTTGGTTCT 1911827 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327931344595