Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trametes_20hirsuta_20[genbank_20GCA_5F001302255.2_202017-02-03]
13 sequences; 37,433,966 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq6 300 3e-76
seq8 116 7e-21
>seq6
Length=3889359
Score = 300 bits (332), Expect = 3e-76
Identities = 467/658 (71%), Gaps = 16/658 (2%)
Strand=Plus/Minus
Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359
|||||| |||||||||||||| || ||| ||||||||| ||||| || ||||||
Sbjct 952792 ATCTGGCAAATGTACAAGAAGGCCGAGGCATCCTTCTGGACCGCTGAGGAAATGGACCTG 952733
Query 42360 GCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAG-AACGA--AAAGTTT-TTCCTCAA 42415
||||||| | | |||| | || | || | ||||| || | ||| ||
Sbjct 952732 TCCAAGGATCTGCATGACTGGAACA-ACCGCCTCAACAACGATGAACGCCACTTCATCTC 952674
Query 42416 AAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAG 42475
|| | ||||| |||||||||||||| ||||| || ||||| |||||||||| |
Sbjct 952673 GCACGTTCTGGCGTTCTTCGCCGCCTCCGACGGTATCGTCAACGAGAACCTGGTAGAGCG 952614
Query 42476 GTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCAT 42535
||| || ||||| ||| ||||||||||||||||||||||||||||| ||
Sbjct 952613 TTTCTCCAACGAGGTCCAGGCGGCCGAGGCGCGCTGCTTCTACGGCTTCCAGATCATGAT 952554
Query 42536 AGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGT 42595
|||||| | ||||||||| |||| | || || ||||||| ||| ||| ||||
Sbjct 952553 GGAGAACATTCACTCTGAGACGTACTCGCTCCTCATCGACACGTATATCAAGGACCCCGC 952494
Query 42596 CGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGA 42655
|||| | || ||| | ||||| ||||| || |||||||| ||||||||||| ||
Sbjct 952493 ACAGCGCGAGCACCTCTTCGATGCCATCGAGACTATCCCCTGCATTAAGAAGAAGGCTGA 952434
Query 42656 CTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTT 42715
||||| || ||||||| | || || | |||| || | || ||||||||
Sbjct 952433 TTGGGCTCTTCGCTGGATCTCGGACAAGGAGTCAGCCTTCGCTGAACGCCTTGTAGCCTT 952374
Query 42716 TACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCA 42775
| ||||||||||| ||||| ||||| ||| | |||||||||||||||||||||||| |
Sbjct 952373 CGCTGCCGTCGAGGGTATCTTTTTCTCTGGCTCTTTCGCCTCCATCTTCTGGCTCAAGAA 952314
Query 42776 GAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCT 42835
| | | |||||| || ||||||||||| ||||| |||||| | | || ||||| |
Sbjct 952313 GCGCGGCTTGATGCCTGGCCTCACCTTCTCTAACGAGCTCATCTCCCGCGATGAGGGCAT 952254
Query 42836 GCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCT---CAGGCACAAGC-CCTCGA 42891
||| | ||||| |||||| | || ||| |||||| | |||| || || |||
Sbjct 952253 GCACACCGACTTCGCCTGCTTGCTCTTC---AGCCACATGAAGAGGCGGCCGCACCCCGA 952197
Query 42892 AGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCAC 42949
|| | ||||| || || | |||||||| ||||| ||| |||||||||||||
Sbjct 952196 --GATC--GTCCGTCAGATTATTATCGAGGCCGTCGAGATTGAGCAGGAGTTCCTCAC 952143
Score = 280 bits (310), Expect = 3e-70
Identities = 386/533 (72%), Gaps = 15/533 (3%)
Strand=Plus/Plus
Query 42423 CTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATG 42482
|| ||||||||||||||||| ||||| || ||||| |||||||| | | |||||
Sbjct 954384 CTCGCCTTCTTCGCCGCCTCGGACGGGATCGTCAACGAGAACCTCGTCGAGCGGTTCTCC 954443
Query 42483 AAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAAC 42542
|| || |||||| | ||||||||||||||||||||||||||||| || ||||||
Sbjct 954444 AACGAAGTGCAGGCCGCCGAGGCGCGCTGCTTCTACGGCTTCCAGATCATGATCGAGAAC 954503
Query 42543 GTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGCGT 42602
|||||||| ||| |||| | || || |||||||| ||| || |||| ||||
Sbjct 954504 GTGCACTCGGAGACGTACTCGCTCCTCATCGACACGTACGTCCGCGACCCCGCGCAGCG- 954562
Query 42603 AACGGG---CTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGG 42659
|| | |||||| | || || | || || |||||| || | ||||| ||||||
Sbjct 954563 --CGCGTTCCTGTTCGACGCGATCAACACCATCCCCTGCGTCGCGCGCAAGGCCGACTGG 954620
Query 42660 GCGCTCAACTGGATCG-AGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTAC 42718
|| || |||||||| || || || | | |||| ||| | || || || || |
Sbjct 954621 GCCCTGCGCTGGATCGCCGACTCGCG-CTCCGTCTTCGCAGAGCGCCTCGTCGCGTTCGC 954679
Query 42719 CGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAA 42778
||||||||||||| |||||||||| || |||||||| | ||||||||||||||| ||
Sbjct 954680 CGCCGTCGAGGGCGTCTTCTTCTCCGGGTCCTTCGCCGCGATCTTCTGGCTCAAGAAGCG 954739
Query 42779 GGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCA 42838
| | |||||| || ||||| ||||| ||||| |||||| | | || ||||| ||||
Sbjct 954740 CGGCTTGATGCCTGGTCTCACGTTCTCCAACGAGCTCATCTCCCGCGATGAGGGCATGCA 954799
Query 42839 TAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGC--CCTCGAAGGAG 42896
| |||||||| ||||| |||||| |||||| | | || | || || |
Sbjct 954800 CACCGACTTTGCGTGCCTGCTGTTC---CACCACCTGCGCCGGCGGCCGCATCCCAG--G 954854
Query 42897 CGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCAC 42949
|| || | | |||||| | ||||| ||||||||||||||||||||||||||
Sbjct 954855 CGTGTGCTGAAAATCATCTCCGAGGCTGTGGAGATCGAGAAGGAGTTCCTCAC 954907
>seq8
Length=3112363
Score = 116 bits (128), Expect = 7e-21
Identities = 201/292 (69%), Gaps = 0/292 (0%)
Strand=Plus/Minus
Query 244297 GCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGGGCTGCCCTCGTAGGTCGGGTA 244356
|||||||| ||||||||| ||| |||| | | || || |||| ||| ||| |||
Sbjct 1725092 GCCCCACAGGTCAAACTGAAGCTTGCCCTCGGAAGCAGGACTCCCCTGGTATGTCTCGTA 1725033
Query 244357 GGGACCGTCGCGCTGGGCCAGCTTACAGCTCTCGTCGAGGGCGGCGTAGTAGATGGTCTC 244416
|| || | | ||| |||| || |||||| | |||| || || | |||||| |||||
Sbjct 1725032 AGGCCCATAGATCTGTGCCATCTCACAGCTGGCCTCGACCGCTGCATGGTAGATCGTCTC 1724973
Query 244417 GAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAGGTGAAGGGGATGCCCATCATCAT 244476
||||||| | ||| | | ||| |||| | || |||||| |||| | | |||
Sbjct 1724972 GAAGATCTGCAAGTTGAGTTTGCGAGCCTCAACCGAGTCGAAGGGCATGCGAAGCGCCAT 1724913
Query 244477 GAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTCTGTGTCGCTTGTTGGAGCG 244536
||| | ||||| || ||||| || |||| |||||||| | || ||| ||||||||||
Sbjct 1724912 GAACGCATCGGCAAGACCCTGAACACCGACACCGATGGGACGATGACGCATGTTGGAGCG 1724853
Query 244537 CATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTGTTGAGGTTG 244588
|| || || | || || ||||| |||| || | ||| ||||||
Sbjct 1724852 GTGAGCCTCAGGAATAGGATAGTAGTTGACGTCAATGATACGGTTAAGGTTG 1724801
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944339046544880
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