Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20hirsuta_20[genbank_20GCA_5F001302255.2_202017-02-03] 13 sequences; 37,433,966 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq6 300 3e-76 seq8 116 7e-21 >seq6 Length=3889359 Score = 300 bits (332), Expect = 3e-76 Identities = 467/658 (71%), Gaps = 16/658 (2%) Strand=Plus/Minus Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359 |||||| |||||||||||||| || ||| ||||||||| ||||| || |||||| Sbjct 952792 ATCTGGCAAATGTACAAGAAGGCCGAGGCATCCTTCTGGACCGCTGAGGAAATGGACCTG 952733 Query 42360 GCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAG-AACGA--AAAGTTT-TTCCTCAA 42415 ||||||| | | |||| | || | || | ||||| || | ||| || Sbjct 952732 TCCAAGGATCTGCATGACTGGAACA-ACCGCCTCAACAACGATGAACGCCACTTCATCTC 952674 Query 42416 AAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAG 42475 || | ||||| |||||||||||||| ||||| || ||||| |||||||||| | Sbjct 952673 GCACGTTCTGGCGTTCTTCGCCGCCTCCGACGGTATCGTCAACGAGAACCTGGTAGAGCG 952614 Query 42476 GTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCAT 42535 ||| || ||||| ||| ||||||||||||||||||||||||||||| || Sbjct 952613 TTTCTCCAACGAGGTCCAGGCGGCCGAGGCGCGCTGCTTCTACGGCTTCCAGATCATGAT 952554 Query 42536 AGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGT 42595 |||||| | ||||||||| |||| | || || ||||||| ||| ||| |||| Sbjct 952553 GGAGAACATTCACTCTGAGACGTACTCGCTCCTCATCGACACGTATATCAAGGACCCCGC 952494 Query 42596 CGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGA 42655 |||| | || ||| | ||||| ||||| || |||||||| ||||||||||| || Sbjct 952493 ACAGCGCGAGCACCTCTTCGATGCCATCGAGACTATCCCCTGCATTAAGAAGAAGGCTGA 952434 Query 42656 CTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTT 42715 ||||| || ||||||| | || || | |||| || | || |||||||| Sbjct 952433 TTGGGCTCTTCGCTGGATCTCGGACAAGGAGTCAGCCTTCGCTGAACGCCTTGTAGCCTT 952374 Query 42716 TACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCA 42775 | ||||||||||| ||||| ||||| ||| | |||||||||||||||||||||||| | Sbjct 952373 CGCTGCCGTCGAGGGTATCTTTTTCTCTGGCTCTTTCGCCTCCATCTTCTGGCTCAAGAA 952314 Query 42776 GAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCT 42835 | | | |||||| || ||||||||||| ||||| |||||| | | || ||||| | Sbjct 952313 GCGCGGCTTGATGCCTGGCCTCACCTTCTCTAACGAGCTCATCTCCCGCGATGAGGGCAT 952254 Query 42836 GCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCT---CAGGCACAAGC-CCTCGA 42891 ||| | ||||| |||||| | || ||| |||||| | |||| || || ||| Sbjct 952253 GCACACCGACTTCGCCTGCTTGCTCTTC---AGCCACATGAAGAGGCGGCCGCACCCCGA 952197 Query 42892 AGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCAC 42949 || | ||||| || || | |||||||| ||||| ||| ||||||||||||| Sbjct 952196 --GATC--GTCCGTCAGATTATTATCGAGGCCGTCGAGATTGAGCAGGAGTTCCTCAC 952143 Score = 280 bits (310), Expect = 3e-70 Identities = 386/533 (72%), Gaps = 15/533 (3%) Strand=Plus/Plus Query 42423 CTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATG 42482 || ||||||||||||||||| ||||| || ||||| |||||||| | | ||||| Sbjct 954384 CTCGCCTTCTTCGCCGCCTCGGACGGGATCGTCAACGAGAACCTCGTCGAGCGGTTCTCC 954443 Query 42483 AAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAAC 42542 || || |||||| | ||||||||||||||||||||||||||||| || |||||| Sbjct 954444 AACGAAGTGCAGGCCGCCGAGGCGCGCTGCTTCTACGGCTTCCAGATCATGATCGAGAAC 954503 Query 42543 GTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGCGT 42602 |||||||| ||| |||| | || || |||||||| ||| || |||| |||| Sbjct 954504 GTGCACTCGGAGACGTACTCGCTCCTCATCGACACGTACGTCCGCGACCCCGCGCAGCG- 954562 Query 42603 AACGGG---CTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGG 42659 || | |||||| | || || | || || |||||| || | ||||| |||||| Sbjct 954563 --CGCGTTCCTGTTCGACGCGATCAACACCATCCCCTGCGTCGCGCGCAAGGCCGACTGG 954620 Query 42660 GCGCTCAACTGGATCG-AGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTAC 42718 || || |||||||| || || || | | |||| ||| | || || || || | Sbjct 954621 GCCCTGCGCTGGATCGCCGACTCGCG-CTCCGTCTTCGCAGAGCGCCTCGTCGCGTTCGC 954679 Query 42719 CGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAA 42778 ||||||||||||| |||||||||| || |||||||| | ||||||||||||||| || Sbjct 954680 CGCCGTCGAGGGCGTCTTCTTCTCCGGGTCCTTCGCCGCGATCTTCTGGCTCAAGAAGCG 954739 Query 42779 GGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCA 42838 | | |||||| || ||||| ||||| ||||| |||||| | | || ||||| |||| Sbjct 954740 CGGCTTGATGCCTGGTCTCACGTTCTCCAACGAGCTCATCTCCCGCGATGAGGGCATGCA 954799 Query 42839 TAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGC--CCTCGAAGGAG 42896 | |||||||| ||||| |||||| |||||| | | || | || || | Sbjct 954800 CACCGACTTTGCGTGCCTGCTGTTC---CACCACCTGCGCCGGCGGCCGCATCCCAG--G 954854 Query 42897 CGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCAC 42949 || || | | |||||| | ||||| |||||||||||||||||||||||||| Sbjct 954855 CGTGTGCTGAAAATCATCTCCGAGGCTGTGGAGATCGAGAAGGAGTTCCTCAC 954907 >seq8 Length=3112363 Score = 116 bits (128), Expect = 7e-21 Identities = 201/292 (69%), Gaps = 0/292 (0%) Strand=Plus/Minus Query 244297 GCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGGGCTGCCCTCGTAGGTCGGGTA 244356 |||||||| ||||||||| ||| |||| | | || || |||| ||| ||| ||| Sbjct 1725092 GCCCCACAGGTCAAACTGAAGCTTGCCCTCGGAAGCAGGACTCCCCTGGTATGTCTCGTA 1725033 Query 244357 GGGACCGTCGCGCTGGGCCAGCTTACAGCTCTCGTCGAGGGCGGCGTAGTAGATGGTCTC 244416 || || | | ||| |||| || |||||| | |||| || || | |||||| ||||| Sbjct 1725032 AGGCCCATAGATCTGTGCCATCTCACAGCTGGCCTCGACCGCTGCATGGTAGATCGTCTC 1724973 Query 244417 GAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAGGTGAAGGGGATGCCCATCATCAT 244476 ||||||| | ||| | | ||| |||| | || |||||| |||| | | ||| Sbjct 1724972 GAAGATCTGCAAGTTGAGTTTGCGAGCCTCAACCGAGTCGAAGGGCATGCGAAGCGCCAT 1724913 Query 244477 GAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTCTGTGTCGCTTGTTGGAGCG 244536 ||| | ||||| || ||||| || |||| |||||||| | || ||| |||||||||| Sbjct 1724912 GAACGCATCGGCAAGACCCTGAACACCGACACCGATGGGACGATGACGCATGTTGGAGCG 1724853 Query 244537 CATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTGTTGAGGTTG 244588 || || || | || || ||||| |||| || | ||| |||||| Sbjct 1724852 GTGAGCCTCAGGAATAGGATAGTAGTTGACGTCAATGATACGGTTAAGGTTG 1724801 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944339046544880