Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20hirsuta_20[genbank_20GCA_5F001302255.2_202017-02-03] 13 sequences; 37,433,966 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq13 105 6e-18 >seq13 Length=2611572 Score = 105 bits (116), Expect = 6e-18 Identities = 156/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 20486 TGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACGCCGCCCCAAAGTGC 20545 ||||| | |||| ||| | ||||| || || |||| ||||| ||| ||||||||| Sbjct 30843 TGGTCGACGCCCTTGCCGGAGTAGTCGGCGTCGCAGTCCTCGTACTGCGCGCCAAAGTGC 30784 Query 20546 CTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCTTCTGTGCGCCAGGCCGCGC 20605 | |||||||||||| || || || || | || ||||| | | ||| | ||||||||| Sbjct 30783 CGCCACTGGAAACCATAGACGGGGCCGAGGTCGCCCTCGCGGCGGTGTCCGAGGCCGCGC 30724 Query 20606 CCGGCCAGGAACTCCCTGGAGCCATTTTTGTCCCATATCTTGACTCCTGTTCTTGAAAGC 20665 | ||||| || ||||||| || |||||| |||||||| ||| | || ||| Sbjct 30723 TTTTCAAGGAAGTCTTTGGAGCCGTTCCCGTCCCAGATCTTGACGCCTTTGGCGGAGAGC 30664 Query 20666 TCCCTGGAGTCAGTACTCCCCTTCAGAAACCAAAGCAGCTC 20706 | ||||||| || | || | || |||||| | ||||| Sbjct 30663 TGTTTGGAGTCCGTGCAGCCGTGCACAAACCAGATGAGCTC 30623 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441372728276920