Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20hirsuta_20[genbank_20GCA_5F001302255.2_202017-02-03] 13 sequences; 37,433,966 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq1 114 1e-20 seq9 104 2e-17 >seq1 Length=4437623 Score = 114 bits (126), Expect = 1e-20 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 64238 AGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGC 64297 ||||| | || ||||| || ||||||||||| || | | || || ||||||||||| Sbjct 1911541 AGATGCAGGGTAGATTCCTTCTGAATGTTGTAGTCCGACAACGTCCGACCGTCTTCAAGC 1911482 Query 64298 TGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATT 64357 |||||||| ||| | ||||| ||||| ||||| || || || || || || ||||| || Sbjct 1911481 TGCTTGCCAGCAAAGATGAGACGCTGTTGGTCCGGCGGGATACCCTCCTTGTCTTGGATC 1911422 Query 64358 TTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCG 64417 || ||| ||| || | || ||| || || || || | || | ||||| ||| Sbjct 1911421 TTCGCCTTGACATTGTCAATAGTGTCAGAGGACTCAACCTCGAGCGTGATCGTCTTTCCG 1911362 Query 64418 GTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||| || || ||||| |||||||| Sbjct 1911361 GTCAATGTCTTGACGAAGATTTGCAT 1911336 Score = 96.9 bits (106), Expect = 3e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300 |||| || || || || || |||||||| || | | ||||| |||| |||||||| Sbjct 1911818 TGAAGGGTTGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGACCGTCCTCAAGCTGT 1911759 Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360 || || ||| | || | ||| ||||||||||| || || ||||| || || || || || Sbjct 1911758 TTTCCCGCAAAGATCAACCGTTGCTGGTCGGGCGGGATGCCTTCCTTATCCTGGATCTTC 1911699 Query 64361 TGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTC 64420 ||| || || | || || || || ||||| | ||| | |||||||| ||| Sbjct 1911698 GCCTTGACGTTGTCGATCGTGTCTGAGGACTCGACTTCCAGAGTGATAGTCTTGCCCGTC 1911639 Query 64421 AAAGTTTTTACGAAAATTTGCAT 64443 ||||| || ||||| || ||||| Sbjct 1911638 AAAGTCTTCACGAAGATCTGCAT 1911616 Score = 82.4 bits (90), Expect = 8e-11 Identities = 110/153 (72%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||||||||| | | || || || |||| || || || || || ||||||||||| | Sbjct 1911335 ACCGCCGCGGAGACGCAGAACAAGGTGAAGAGTAGACTCCTTCTGGATGTTGTAATCGGA 1911276 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | || || | || |||||||||||||| || | ||||| || |||||||| || || Sbjct 1911275 AAGAGTACGGCCATCCTCAAGCTGCTTGCCCGCGAAGATGAGGCGTTGCTGGTCCGGCGG 1911216 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTAC 64368 || || || || ||||| || ||| ||| || Sbjct 1911215 GATACCCTCCTTGTCTTGGATCTTTGCCTTGAC 1911183 >seq9 Length=3088601 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 ||||| || || || |||||||| || | || || || ||||||| |||||||||||| Sbjct 2856281 GTCGACTCCTTCTGGATGTTGTAGTCCGAGAGAGTACGACCGTCTTCGAGCTGCTTGCCG 2856340 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 ||| | || || |||||||||||||||||||| ||||| || || || || || ||| Sbjct 2856341 GCAAAGATCAGGCGCTGCTGGTCGGGAGGAATACCTTCCTTGTCCTGAATCTTCGCCTTG 2856400 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 ||| || | || || | || || || | ||| | ||||| || || | || Sbjct 2856401 ACATTGTCGATCGTGTCCGATGATTCGACCTCCAGAGTAATCGTCTTACCCGTGAGGGTC 2856460 Query 64427 TTTACGAAAATTTGCAT 64443 || ||||| || ||||| Sbjct 2856461 TTGACGAAGATCTGCAT 2856477 Score = 100 bits (110), Expect = 3e-16 Identities = 162/231 (70%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 |||||| || | | |||||| || || | || || || || ||||||||||| | Sbjct 2856022 ACCGCCACGAAGACGAAGCACAAGGTGCAGGGTGCTCTCCTTCTGGATGTTGTAATCCGA 2856081 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || ||||| | || || |||||||||||||| ||||||| |||||||||||||| || Sbjct 2856082 GAGCGTGCGACCATCCTCGAGCTGCTTGCCGGCGAAAATGAGGCGCTGCTGGTCGGGCGG 2856141 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCG--TCC 64393 ||| || || || || || || || ||| || || | || | ||| || || Sbjct 2856142 AATCCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTGTCGATCGTGT--CCGACGACTCA 2856199 Query 64394 ACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444 || || | || | |||||| ||||||| || || || || || |||||| Sbjct 2856200 ACCTCCAGGGTGATGGTCTTCCCGGTCAGGGTCTTGACAAAGATCTGCATT 2856250 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 64253 TCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAA 64312 || || || |||||||| || | || |||||| |||| || | ||||||||| ||| | Sbjct 2856568 TCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCGTCCTCCAACTGCTTGCCAGCAAAG 2856627 Query 64313 ATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACC 64372 || || ||||| || || || ||||| || || || || || || || ||| ||| Sbjct 2856628 ATAAGACGCTGTTGATCCGGGGGAATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATTG 2856687 Query 64373 TCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACG 64432 || | || || | || || || | || | ||||||||||||||| || || || Sbjct 2856688 TCGATGGTGTCGGAAGACTCGACCTCGAGCGTGATGGTCTTGCCGGTCAAGGTCTTCACA 2856747 Query 64433 AAAATTTGCAT 64443 || || ||||| Sbjct 2856748 AAGATCTGCAT 2856758 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499644718807720