Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20hirsuta_20[genbank_20GCA_5F001302255.2_202017-02-03] 13 sequences; 37,433,966 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq8 87.8 2e-12 >seq8 Length=3112363 Score = 87.8 bits (96), Expect = 2e-12 Identities = 161/236 (68%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 94069 TCCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTC 94128 |||||||| || || || || ||| ||||| |||| ||||||||||| || | | Sbjct 1724054 TCCTACATTGCTGGCACGAACGGATACTCGAACGGAATCGTTCCTATGCTCCGTGTGTAC 1724113 Query 94129 AACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTC 94188 || | | || || ||||| || ||||| || | | | ||| | || || || Sbjct 1724114 GACGCCACTGCCCGTTACGTTGATCAGGGCGGCAACAAGCGTCCGGGCGCGTTTGCTATC 1724173 Query 94189 TATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGC 94248 ||||| ||||| |||||||| || || | ||| | ||||| || ||||||||||| Sbjct 1724174 TATCTTGAGCCTTGGCACGCCGATGTCTTCGAGTTCCTTGACCTTCGCAAGAACCACGGG 1724233 Query 94249 AACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTT 94304 || || || | ||| | ||| | ||||| || || ||||| || ||||| || Sbjct 1724234 AAGGAAGAGGTTCGCGCCCGCGACTTGTTCTATGCCCTTTGGGTACCCGACCTCTT 1724289 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494723119607480