Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20hirsuta_20[genbank_20GCA_5F001302255.2_202017-02-03] 13 sequences; 37,433,966 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq6 91.5 2e-13 >seq6 Length=3889359 Score = 91.5 bits (100), Expect = 2e-13 Identities = 168/245 (69%), Gaps = 6/245 (2%) Strand=Plus/Minus Query 127520 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 127579 ||||| || ||| | ||||| || ||||||||||| || || ||||| ||||| Sbjct 954811 GCAAAGTCGGTGTGCATGCCCTCATCGCGGGAGATGAGCTCGTTGGAGAACGTGAGACCA 954752 Query 127580 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 127639 ||||| | || |||||||| | |||||| ||||| || || || |||||||||| Sbjct 954751 GGCATCAAGCCGCGCTTCTTGAGCCAGAAGATCGCGGCGAAGGACCCGGAGAAGAAGACG 954692 Query 127640 CCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAA---GGAGCGGGACTTTGTATCA 127696 ||||| || |||||||| | || ||||| || || |||||| || | | | Sbjct 954691 CCCTCGACGGCGGCGAACGCGACGAGGCGCTCTGCGAAGACGGAGCGCGAGTCGG---CG 954635 Query 127697 AACCACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCA 127756 | ||| || ||||| | ||||| | ||| || |||| ||| | |||||| || Sbjct 954634 ATCCAGCGCAGGGCCCAGTCGGCCTTGCGCGCGACGCAGGGGATGGTGTTGATCGCGTCG 954575 Query 127757 AAGAG 127761 || || Sbjct 954574 AACAG 954570 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613507100305080