Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20hirsuta_20[genbank_20GCA_5F001302255.2_202017-02-03] 13 sequences; 37,433,966 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq6 125 1e-23 seq8 89.7 8e-13 >seq6 Length=3889359 Score = 125 bits (138), Expect = 1e-23 Identities = 418/650 (64%), Gaps = 3/650 (0%) Strand=Plus/Plus Query 159830 AGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGACACGTTCGTACCCC 159889 || ||||||| |||||||||||| || ||| | | |||||| ||| ||| | Sbjct 952146 AGGAACTCCTGCTCAATCTCGACGGCCTCGATAATAATCTGACGGACGATCTCGGGGTGC 952205 Query 159890 GGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTCCCTCG 159949 ||| | | |||||| | || || | ||| || |||||| ||||| ||||| Sbjct 952206 GGCCGCCTCTTCATGTGGC---TGAAGAGCAAGCAGGCGAAGTCGGTGTGCATGCCCTCA 952262 Query 159950 TCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTTTGAGC 160009 || || ||||||| |||||| || | | ||||||| ||||| | || ||| |||||| Sbjct 952263 TCGCGGGAGATGAGCTCGTTAGAGAAGGTGAGGCCAGGCATCAAGCCGCGCTTCTTGAGC 952322 Query 160010 CAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAACGCCACG 160069 || || |||| || |||| || |||||||| ||||| ||||| || || || || Sbjct 952323 CAGAAGATGGAGGCGAAAGAGCCAGAGAAAAAGATACCCTCGACGGCAGCGAAGGCTACA 952382 Query 160070 AGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATTCAGCCTTC 160129 || | ||| | || | | | |||| | |||| | ||||| ||||||||| Sbjct 952383 AGGCGTTCAGCGAAGGCTGACTCCTTGTCCGAGATCCAGCGAAGAGCCCAATCAGCCTTC 952442 Query 160130 TTTGCGATGCACGGCATGCGCTCGACGGCGTTAAACAATCTGTCCTGCTCCTTCACATCC 160189 || ||||| || || ||||| ||| | || | || ||| ||| Sbjct 952443 TTCTTAATGCAGGGGATAGTCTCGATGGCATCGAAGAGGTGCTCGCGCTGTGCGGGGTCC 952502 Query 160190 TTGATCAGAGTAGCAATCAGCTTCGAGTACATTTCTGCGTGCACATTTTCGATGGCCATC 160249 ||||| || | || || ||||||| | || | ||| | || || || ||| Sbjct 952503 TTGATATACGTGTCGATGAGGAGCGAGTACGTCTCAGAGTGAATGTTCTCCATCATGATC 952562 Query 160250 TGAAAGTTGTAGAAATATGTCGCCTCCAGATACTGCACCTCCTGTGTGAACCTTTGACCC 160309 || ||| |||||| | |||||| ||| ||||| | | ||| | | || Sbjct 952563 TGGAAGCCGTAGAAGCAGCGCGCCTCGGCCGCCTGGACCTCGTTGGAGAAACGCTCTACC 952622 Query 160310 AGATTGGCATTAACCAACCCGTCGGCGGCCGCAAAGAAAGCCAACACGTGAGAGATGAAA 160369 || || | || || | ||||||| ||| || ||||| |||| ||||| |||||||| Sbjct 952623 AGGTTCTCGTTGACGATACCGTCGGAGGCGGCGAAGAACGCCAGAACGTGCGAGATGAAG 952682 Query 160370 TGTCTCTCGTCTTTGTTGAGTCTCTTTTCCCAGTGTGTCACGTCTTGGGCCAAATCAACC 160429 || | || || |||||||| | || | ||||| || || | || || || | Sbjct 952683 TGGCGTTCATCGTTGTTGAGGCGGTTGTTCCAGTCATGCAGATCCTTGGACAGGTCCATT 952742 Query 160430 TCTTCCGCGCTCCAATTGGCAGCCTGAGCAGTTTTGTACATGGCCCAGAT 160479 || || ||| |||| || |||| || | |||||||| |||||| Sbjct 952743 TCCTCAGCGGTCCAGAAGGATGCCTCGGCCTTCTTGTACATTTGCCAGAT 952792 Score = 107 bits (118), Expect = 3e-18 Identities = 122/164 (74%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 159914 AACAGGAGGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGAC 159973 ||||| ||||||||||||||| ||||| ||||| || || ||||||| ||||||||| Sbjct 954823 AACAGCAGGCACGCAAAGTCGGTGTGCATGCCCTCATCGCGGGAGATGAGCTCGTTGGAG 954764 Query 159974 ATGATGAGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCG 160033 | |||| || ||||| | || ||| |||||||| || || || || || | ||| Sbjct 954763 AACGTGAGACCAGGCATCAAGCCGCGCTTCTTGAGCCAGAAGATCGCGGCGAAGGACCCG 954704 Query 160034 CTAAAAAAGATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTC 160077 || |||| ||||| ||||| || ||||| ||||| | ||| Sbjct 954703 GAGAAGAAGACGCCCTCGACGGCGGCGAACGCGACGAGGCGCTC 954660 >seq8 Length=3112363 Score = 89.7 bits (98), Expect = 8e-13 Identities = 158/224 (71%), Gaps = 6/224 (3%) Strand=Plus/Minus Query 203841 TGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCCGG 203900 |||| || ||||||| ||||| | |||| || | | | || ||||||||||| | Sbjct 1725685 TGTCGACGGTGAACTTGATGGCCTGAGCGGCGGGGCGTGTGCGTAGGTAGTACATGCCCG 1725626 Query 203901 TCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTG-CTCACGTTGGGG 203959 |||| |||||||||| |||||| || | ||||||| | || | | | ||| |||| Sbjct 1725625 TCTTGAGGCCCTTCTTCCACCCATAGAAGTGCATGCTCGTCAACTGGCCGTTCGTGGGGG 1725566 Query 203960 -TCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGG 204017 | || | ||| | ||| || ||||| ||| ||||||| ||||| ||||| |||| Sbjct 1725565 ATTGG--AGGTGGACGTTAAGTGACTGCGACTGGCAGATGAAA-GCGCCTCGATCCGCGG 1725509 Query 204018 CCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTG 204061 | | | | | |||||||||| |||||||| || |||||| Sbjct 1725508 CAAGGTCAAGGACCTTCTTCTGCGAGATCTCCCAGACGGTCTTG 1725465 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795155070787280