Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20hirsuta_20[genbank_20GCA_5F001302255.2_202017-02-03] 13 sequences; 37,433,966 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq6 336 2e-87 seq1 120 3e-22 seq9 116 4e-21 seq12 100 3e-16 >seq6 Length=3889359 Score = 336 bits (372), Expect = 2e-87 Identities = 415/562 (74%), Gaps = 9/562 (2%) Strand=Plus/Plus Query 132884 TGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGC 132943 |||| | |||||| || |||||| |||| |||||| || | ||| ||||| ||||| Sbjct 952225 TGAAGAGCAAGCAGGCGAAGTCGGTGTGCATGCCCTCATCGCGGGAGATGAGCTCGTTAG 952284 Query 132944 TGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGC 133003 ||| || | ||| ||||| | |||||| || |||||||| || |||| ||||||| || Sbjct 952285 AGAAGGTGAGGCCAGGCATCAAGCCGCGCTTCTTGAGCCAGAAGATGGAGGCGAAAGAGC 952344 Query 133004 CCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTT 133063 | || || |||| ||||||||||| ||||| || || ||||| || |||| | | | Sbjct 952345 CAGAGAAAAAGATACCCTCGACGGCAGCGAAGGCTACAAGGCGTTCAGCGAAGGCTGACT 952404 Query 133064 CTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTT 133123 | ||| | ||||||||| || ||||| || ||||| | || | ||| || || || | Sbjct 952405 CCTTGTCCGAGATCCAGCGAAGAGCCCAATCAGCCTTCTTCTTAATGCAGGGGATAGTCT 952464 Query 133124 CGATGGCGTTCAACAAACGGAGTTT-CTCT-TCCGAGGAACGC-ACGTAGGTGTCGATGA 133180 ||||||| | || | || | | | || | || || | | || |||||||||| Sbjct 952465 CGATGGCATCGAAGA---GGTGCTCGCGCTGTGCGGGGTCCTTGATATACGTGTCGATGA 952521 Query 133181 GGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACC 133240 || ||| ||| | || ||||| | ||||||||| ||| || |||||||| ||||| | Sbjct 952522 GGAGCGAGTACGTCTCAGAGTGAATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGC 952581 Query 133241 GCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGC 133300 |||||||| || |||| || || | | ||||||||| ||||| || ||||||||||| | Sbjct 952582 GCGCCTCGGCCGCCTGGACCTCGTTGGAGAAACGCTCTACCAGGTTCTCGTTGACGATAC 952641 Query 133301 CGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCA 133360 ||||| ||||||||| || ||||| |||||| |||||| ||||| || | || ||| | Sbjct 952642 CGTCGGAGGCGGCGAAGAACGCCAGAACGTGCGAGATGAAGTGGCGTTCATCGTTGTTGA 952701 Query 133361 AGCG---CTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACG 133417 ||| | |||||| || |||||||||||||||| ||||| ||||||| || | Sbjct 952702 GGCGGTTGTTCCAGTCATGCAGATCCTTGGACAGGTCCATTTCCTCAGCGGTCCAGAAGG 952761 Query 133418 ACGCCTCGGCTTTTTTGTACAT 133439 | |||||||| || |||||||| Sbjct 952762 ATGCCTCGGCCTTCTTGTACAT 952783 Score = 309 bits (342), Expect = 3e-79 Identities = 453/632 (72%), Gaps = 13/632 (2%) Strand=Plus/Minus Query 132816 CTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCCGCGCT-CGGCCGTTGCA 132874 |||||| | || || |||| || ||||| | || ||| | | | | |||||| | Sbjct 954893 CTCGATCTCCACAGCCTCGGAGATGATTTTCAGCACACGC-CTGGGATGCGGCCGCCGGC 954835 Query 132875 CCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGA 132934 || || | ||||| || ||| ||||||||| |||| |||||| || | ||| |||| Sbjct 954834 GCAGGTGGTGGAACAGCAGGCACGCAAAGTCGGTGTGCATGCCCTCATCGCGGGAGATGA 954775 Query 132935 GTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGG 132994 | |||||| ||| || | || ||||| | |||||| || |||||||| || || |||| Sbjct 954774 GCTCGTTGGAGAACGTGAGACCAGGCATCAAGCCGCGCTTCTTGAGCCAGAAGATCGCGG 954715 Query 132995 CGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGA 133054 |||| || || |||||||||||||||||||| ||||| || || |||||||| ||| Sbjct 954714 CGAAGGACCCGGAGAAGAAGACGCCCTCGACGGCGGCGAACGCGACGAGGCGCTCTGCGA 954655 Query 133055 ACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACG 133114 | || | ||||||||||||||| ||||| |||||||| |||||| | Sbjct 954654 AGACGGAGCGCGAGTCGGCGATCCAGCGCAGGGCCCAGTCGGCCTTGCGCGCGACGCAGG 954595 Query 133115 GCATCGTTTCGATGGCGTTCAACA--AACG-GAGTTTCTCTTCCGAGGAACGCACGTAGG 133171 | || || | ||| |||| |||| |||| | | | | | | | || ||||| | Sbjct 954594 GGATGGTGTTGATCGCGTCGAACAGGAACGCGCGCTGCGCG---GGGTCGCGGACGTACG 954538 Query 133172 TGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGT 133231 ||||||||||| ||| ||| | |||||||| |||||||| || ||| || ||||||| Sbjct 954537 TGTCGATGAGGAGCGAGTACGTCTCCGAGTGCACGTTCTCGATCATGATCTGGAAGCCGT 954478 Query 133232 AAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGT 133291 | ||||| ||||||||| | |||||||||| | | ||| |||||||| || || |||| Sbjct 954477 AGAAGCAGCGCGCCTCGGCGGCCTGCACTTCGTTGGAGAACCGCTCGACGAGGTTCTCGT 954418 Query 133292 TGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGT 133351 ||||||| ||||| ||||||||| ||||| || |||| || ||| || |||||| Sbjct 954417 TGACGATCCCGTCCGAGGCGGCGAAGAAGGCGAGGACGTAGGAGACGAAGTGCTGCTCGT 954358 Query 133352 TGTCGTTCAAGC--GCTC--CCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACG 133407 || | | ||| | || |||||| ||| | ||| ||||| | ||| |||||| Sbjct 954357 TGGGGGT-GAGCTTGGTCGTCCAGTCCATGAGGTCGTAGGAGAGGTCGATCTCTTCGACG 954299 Query 133408 GTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 ||||| || || || | ||| | |||||||| Sbjct 954298 GTCCAGAAGGATGCTTGGGCGTCCTTGTACAT 954267 >seq1 Length=4437623 Score = 120 bits (132), Expect = 3e-22 Identities = 167/229 (73%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || ||||||||||| || |||||| |||| || ||| | | Sbjct 1911108 ATGCAGATCTTTGTCAAGACCCTCACGGGCAAGACGATCACCCTCGAGGTTGAGTCTTCG 1911167 Query 38304 GACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACC 38361 |||| | | | |||| | || | ||| |||| ||||| ||||| | ||||||| |||| Sbjct 1911168 GACACCATCGATAACG-TCAAGGCAAAGATCCAAGACAAGGAGGGTA-TCCCGCCGGACC 1911225 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | || || ||||| | ||||||||| ||||| || || | || || || ||| |||| Sbjct 1911226 AGCAACGCCTCATCTTCGCGGGCAAGCAGCTTGAGGATGGCCGTACTCTTTCCGATTACA 1911285 Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||| ||||| | || || || | || |||||| | | ||||| Sbjct 1911286 ACATCCAGAAGGAGTCTACTCTTCACCTTGTTCTGCGTCTCCGCGGCGG 1911334 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || | |||||||| || ||||| | || |||||| || | Sbjct 1911616 ATGCAGATCTTCGTGAAGACTTTGACGGGCAAGACTATCACTCTGGAAGTCGAGTCCTCA 1911675 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | || |||| || || || || || || ||||||| Sbjct 1911676 GACACGATCGACAACG-TCAAGGCGAAGATCCAGGATAAGGAAGGCATCCCGCCCGACCA 1911734 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 || ||| | || | ||||| |||||||| || |||| ||||| || ||||||||| Sbjct 1911735 GCAACGGTTGATCTTTGCGGGAAAACAGCTTGAGGACGGTCGCACTCTGTCCGACTACAA 1911794 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||| ||||| | || || || ||||| || ||| || | || || Sbjct 1911795 CATCCAGAAGGAGTCAACCCTTCACTTGGTTCTCCGTCTGCGTGGTGG 1911842 Score = 104 bits (114), Expect = 2e-17 Identities = 147/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || |||||||| || ||||| ||||| | || |||||| | || Sbjct 1911844 ATGCAGATCTTCGTTAAGACGCTCACCGGGAAAACAATCACATTGGAGGTCGAGTCTTCC 1911903 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 || | | | | | || | || || | ||||| ||||| |||||| | ||||| Sbjct 1911904 GATACGATCGACAATGTGAAGGCGAAGATACAGGACAAGGAGGGCATTCCCCCGGACCAG 1911963 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| ||||| | ||| || || ||| |||| |||| || || || ||||||||| Sbjct 1911964 CAGCGCCTCATCTTCGCTGGGAAGCAGTTGGAGGACGGCCGTACGCTGTCTGACTACAAC 1912023 Query 38424 ATCCAAAAGGA-AGCGACGCTGCA 38446 ||||| ||||| ||| || ||||| Sbjct 1912024 ATCCAGAAGGAGAGC-ACTCTGCA 1912046 Score = 100 bits (110), Expect = 3e-16 Identities = 151/211 (72%), Gaps = 3/211 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || | || || || || ||||| |||| || ||| || | Sbjct 1911336 ATGCAAATCTTCGTCAAGACATTGACCGGAAAGACGATCACGCTCGAGGTTGAGTCCTCT 1911395 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG-ACCA 38362 |||| | | | | || | || |||| ||||| ||||| || ||||||| |||| Sbjct 1911396 GACACTATTGACAATGTCAAGGCGAAGATCCAAGACAAGGAGGGTAT-CCCGCCGGACCA 1911454 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| ||||| | || ||||| ||||| || |||| || || | |||||||| Sbjct 1911455 ACAGCGTCTCATCTTTGCTGGCAAGCAGCTTGAAGACGGTCGGACGTTGTCGGACTACAA 1911514 Query 38423 CATCCAAAAGGAAGCGACGCTGCAT-TTGGT 38452 ||| || |||||| | || |||||| ||||| Sbjct 1911515 CATTCAGAAGGAATCTACCCTGCATCTTGGT 1911545 Score = 86.0 bits (94), Expect = 6e-12 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 38347 GAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCA 38406 |||| || ||||||| ||||| || || | ||||||||| ||||| || || | || | Sbjct 1910983 GAATCCCTCCCGACCAGCAGCGCCTGATCTTCGCGGGCAAGCAGCTCGAGGATGGCCGGA 1911042 Query 38407 CCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAG 38466 |||| |||||||||||||| |||||| | |||||||| | || || ||| | | | Sbjct 1911043 CCCTGTCGGACTACAACATCCAGAAGGAATCTACGCTGCACCTCGTCCTCCGTCTCCGTG 1911102 Query 38467 GCGGC 38471 ||||| Sbjct 1911103 GCGGC 1911107 Score = 84.2 bits (92), Expect = 2e-11 Identities = 70/86 (81%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 38349 ATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACC 38408 || ||| ||||||| ||||| || || | ||| ||||| ||||| || |||| ||||| Sbjct 3825002 ATCCCCCCCGACCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACG 3824943 Query 38409 CTCAACGACTACAACATCCAAAAGGA 38434 |||| ||||||||||||||| ||||| Sbjct 3824942 CTCAGCGACTACAACATCCAGAAGGA 3824917 >seq9 Length=3088601 Score = 116 bits (128), Expect = 4e-21 Identities = 167/230 (73%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302 |||||| || || || || || || || || || ||||||||| | || || ||| | | Sbjct 2856250 AATGCAGATCTTTGTCAAGACCCTGACCGGGAAGACCATCACCCTGGAGGTTGAGTCGTC 2856191 Query 38303 CGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361 |||| | | |||| | || | || |||| ||||| ||||| ||||| |||||| Sbjct 2856190 GGACACGATCGACAACG-TGAAGGCCAAGATCCAGGACAAGGAGGGGATTCCGCCCGACC 2856132 Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421 | ||||| ||||||| ||| ||||| ||||| || || | ||||| ||| || |||| Sbjct 2856131 AGCAGCGCCTCATTTTCGCCGGCAAGCAGCTCGAGGATGGTCGCACGCTCTCGGATTACA 2856072 Query 38422 ACATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||||| ||||| ||| || ||||| | ||||| ||| | | ||||| Sbjct 2856071 ACATCCAGAAGGAGAGC-ACCCTGCACCTTGTGCTTCGTCTTCGTGGCGG 2856023 Score = 114 bits (126), Expect = 1e-20 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || | || ||||| |||||||| |||| |||||| | || Sbjct 2856758 ATGCAGATCTTTGTGAAGACCTTGACCGGCAAGACCATCACGCTCGAGGTCGAGTCTTCC 2856699 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || | || || | ||||| ||||| |||||| | || ||| Sbjct 2856698 GACACCATCGACAATGTCAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCGGATCAA 2856639 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | || ||||| ||| |||| |||| ||||||||| |||||||||| Sbjct 2856638 CAGCGTCTTATCTTTGCTGGCAAGCAGTTGGAGGACGGTCGCACCCTCTCCGACTACAAC 2856579 Query 38424 ATCCAAAAGGA 38434 ||||| ||||| Sbjct 2856578 ATCCAGAAGGA 2856568 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || |||||||| || || || || | || ||||| | | Sbjct 2856477 ATGCAGATCTTCGTCAAGACCCTCACGGGTAAGACGATTACTCTGGAGGTCGAATCATCG 2856418 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || | || || | ||||| || || ||||| ||||||| Sbjct 2856417 GACACGATCGACAATGTCAAGGCGAAGATTCAGGACAAGGAAGGTATTCCTCCCGACCAG 2856358 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | || ||||| ||||| || |||| || || ||| ||||||||| Sbjct 2856357 CAGCGCCTGATCTTTGCCGGCAAGCAGCTCGAAGACGGTCGTACTCTCTCGGACTACAAC 2856298 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| ||||| |||| ||||| | || || ||| || | || || Sbjct 2856297 ATCCAGAAGGAGTCGACTCTGCACCTTGTCCTCCGTCTGCGTGGTGG 2856251 >seq12 Length=2614590 Score = 100 bits (110), Expect = 3e-16 Identities = 88/110 (80%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 38349 ATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACC 38408 |||||| ||||||| ||||| || |||| ||||||||| ||||| || || | || ||| Sbjct 1420305 ATTCCCCCCGACCAGCAGCGCCTGATTTTCGCGGGCAAGCAGCTCGAGGATGGCCGTACC 1420364 Query 38409 CTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 |||| ||||||||||||||| ||||| | || || || ||||||| || Sbjct 1420365 CTCAGCGACTACAACATCCAGAAGGAGTCCACCCTCCACCTGGTGCTCCG 1420414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172718721920