Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20hirsuta_20[genbank_20GCA_5F001302255.2_202017-02-03] 13 sequences; 37,433,966 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq1 111 1e-19 seq9 107 1e-18 >seq1 Length=4437623 Score = 111 bits (122), Expect = 1e-19 Identities = 143/195 (73%), Gaps = 8/195 (4%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| || || ||||| | || |||| || ||||| || || || || Sbjct 1911298 TCCTTCTGGATGTTGTAATCGGAAAGAGTACGGCCATCCTCAAGCTGCTTGCCCGCGAAG 1911239 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || ||||||||||| |||| | ||||||||||| ||||| ||||| Sbjct 1911238 ATGAGGCGTTGCTGGTCCGGCGGGATACCCTCCTTGTCTTGGATCTTTGCCTTGAC---- 1911183 Query 34911 GCTATCGAT--TCACCG--GCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 | ||||||| | ||| | |||||| |||| ||| || || || |||||||| ||||| Sbjct 1911182 GTTATCGATGGTGTCCGAAGACTCAACCTCGAGGGTGATCGTCTTGCCCGTGAGGGTCTT 1911123 Query 34967 CACAAAGATCTGCAT 34981 |||||||||||||| Sbjct 1911122 GACAAAGATCTGCAT 1911108 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||||||||||| || || ||||| ||||| ||||| || || | || | || || Sbjct 1911825 AACCAAGTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGACCGTCCTC 1911766 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 ||||||||||| ||||| || | ||||||||||| |||| | || ||||| || Sbjct 1911765 AAGCTGTTTTCCCGCAAAGATCAACCGTTGCTGGTCGGGCGGGATGCCTTCCTTATCCTG 1911706 Query 34892 AATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTT 34951 |||||| |||||| | |||| || || ||| || || | || || || || Sbjct 1911705 GATCTTCGCCTTGACGTTGTCGATCGTGTCTGAGGACTCGACTTCCAGAGTGATAGTCTT 1911646 Query 34952 TCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 ||||| | ||||||||| ||||||||||| Sbjct 1911645 GCCCGTCAAAGTCTTCACGAAGATCTGCAT 1911616 Score = 91.5 bits (100), Expect = 1e-13 Identities = 136/193 (70%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||| ||||||||||| |||||||| | | || | || || ||||| || || ||||| Sbjct 1911527 TTCCTTCTGAATGTTGTAGTCCGACAACGTCCGACCGTCTTCAAGCTGCTTGCCAGCAAA 1911468 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || || || || ||||| |||| | ||||||||||| |||||| ||||| Sbjct 1911467 GATGAGACGCTGTTGGTCCGGCGGGATACCCTCCTTGTCTTGGATCTTCGCCTTGACATT 1911408 Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 | || | ||| || |||||| |||| || || || ||||| || | ||||| || Sbjct 1911407 GTCAATAGTGTCAGAGGACTCAACCTCGAGCGTGATCGTCTTTCCGGTCAATGTCTTGAC 1911348 Query 34970 AAAGATCTGCATA 34982 ||||| |||||| Sbjct 1911347 GAAGATTTGCATA 1911335 Score = 84.2 bits (92), Expect = 1e-11 Identities = 146/211 (69%), Gaps = 1/211 (0%) Strand=Plus/Minus Query 34773 ACCAAG-TGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 |||||| || | ||||| || ||||| ||||| ||||| || || | || | || || Sbjct 1912053 ACCAAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCAGACAGCGTACGGCCGTCCTC 1911994 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 || ||| || || || || || || || |||||||| | || | ||||||||||| Sbjct 1911993 CAACTGCTTCCCAGCGAAGATGAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTG 1911934 Query 34892 AATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTT 34951 |||||| || || | |||| || | ||| || || | || || ||||| Sbjct 1911933 TATCTTCGCCTTCACATTGTCGATCGTATCGGAAGACTCGACCTCCAATGTGATTGTTTT 1911874 Query 34952 TCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || ||||| ||||| || |||||||||||| Sbjct 1911873 CCCGGTGAGCGTCTTAACGAAGATCTGCATA 1911843 >seq9 Length=3088601 Score = 107 bits (118), Expect = 1e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 34785 GTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCG 34844 ||||| || ||||| ||||| || ||||| || | || |||| || ||||| || ||| Sbjct 2856053 GTGCTCTCCTTCTGGATGTTGTAATCCGAGAGCGTGCGACCATCCTCGAGCTGCTTGCCG 2856112 Query 34845 GCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTG 34904 || || || || || |||||||| |||| | |||||||||||| ||||| || Sbjct 2856113 GCGAAAATGAGGCGCTGCTGGTCGGGCGGAATCCCCTCCTTGTCCTGGATCTTGGCCTTC 2856172 Query 34905 ACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTC 34964 ||| | |||| || | |||||| || | ||| ||||| || || || || ||| Sbjct 2856173 ACGTTGTCGATCGTGTCCGACGACTCAACCTCCAGGGTGATGGTCTTCCCGGTCAGGGTC 2856232 Query 34965 TTCACAAAGATCTGCAT 34981 || |||||||||||||| Sbjct 2856233 TTGACAAAGATCTGCAT 2856249 Score = 89.7 bits (98), Expect = 3e-13 Identities = 139/195 (71%), Gaps = 8/195 (4%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| |||||||| || | || | || || ||||| || |||||||| Sbjct 2856287 TCCTTCTGGATGTTGTAGTCCGAGAGAGTACGACCGTCTTCGAGCTGCTTGCCGGCAAAG 2856346 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| | || | || |||||||| ||||||| ||||| || Sbjct 2856347 ATCAGGCGCTGCTGGTCGGGAGGAATACCTTCCTTGTCCTGAATCTTCGCCTTGAC--AT 2856404 Query 34911 GCTATCGAT--TCACCG--GCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 | ||||| | ||| | || || || | || || || || |||||||| ||||| Sbjct 2856405 --TGTCGATCGTGTCCGATGATTCGACCTCCAGAGTAATCGTCTTACCCGTGAGGGTCTT 2856462 Query 34967 CACAAAGATCTGCAT 34981 || ||||||||||| Sbjct 2856463 GACGAAGATCTGCAT 2856477 Score = 89.7 bits (98), Expect = 3e-13 Identities = 151/215 (70%), Gaps = 9/215 (4%) Strand=Plus/Plus Query 34773 ACCAAG-TGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 |||||| || | ||||| || ||||| ||||| ||||| || ||| | || | || || Sbjct 2856549 ACCAAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCGTCCTC 2856608 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 || ||| || || ||||| || || || || || || | || | ||||||||||| Sbjct 2856609 CAACTGCTTGCCAGCAAAGATAAGACGCTGTTGATCCGGGGGAATGCCCTCCTTGTCCTG 2856668 Query 34892 AATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGG 34947 |||||| ||||| || | ||||| || | ||| || |||| || |||| Sbjct 2856669 AATCTTGGCCTTGAC--AT--TGTCGATGGTGTCGGAAGACTCGACCTCGAGCGTGATGG 2856724 Query 34948 TTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 | || || || | ||||||||||||||||||||| Sbjct 2856725 TCTTGCCGGTCAAGGTCTTCACAAAGATCTGCATA 2856759 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324633548565864